RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA904835", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA904835 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29803094 29803094 PRJNA904835_P_NODE_40691_length_296_cov_1.372197_g40435_i0 PRJNA904835 40691 296 1.3721969999999999 4.06170312 Basidiobolus ranarum 34480 Fungi Fungi 135 6.35e-37   NR KAK9764045.1 34480 g40435 i0 71.6 3.85135135135135 95 27 96.3 0 1 285 92 186 KAK9764045.1 hypothetical protein K7432_008806 [Basidiobolus ranarum] diamond 1140 135 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
32458840 32458840 PRJNA904835_P_NODE_36079_length_320_cov_2.429150_g35823_i0 PRJNA904835 36079 320 2.42915 7.77328 Coemansia javaensis 2761396 Fungi Fungi 48.9 6.06e-4   NR KAJ2782667.1 2761396 g35823 i0 51.2 0.80625 43 21 40.3 0 180 52 211 253 KAJ2782667.1 hypothetical protein H4R18_002145 [Coemansia javaensis] diamond 258 48.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia javaensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;