RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA904835", tax_kingdom = "Fungi" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA904835 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13636940 13636940 PRJNA904835_P_NODE_41331_length_293_cov_1.050000_g41075_i0 PRJNA904835 41331 293 1.05 3.0765 Fungi 4751 Fungi Fungi 144 1.0099999999999999e-38   NR WFD34385.1 948313 g41075 i0 69.1 23.7542662116041 94 29 96.2 0 290 9 353 446 WFD34385.1 translation elongation factor EF-1 alpha [Malassezia cuniculi] diamond 6960 145 0.993103448275862 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia cuniculi
23835815 23835815 PRJNA904835_P_NODE_55099_length_246_cov_0.890173_g54843_i0 PRJNA904835 55099 246 0.890173 2.18982558 Malassezia restricta 76775 Fungi Fungi 291 4.33e-74   NTclustered gi|1546632402|ref|XM_027627861.1| 76775 g54843 i0 99.375 54.2032520325203 160 1 65 0 1 160 1224 1383 Malassezia restricta elongation factor 1-alpha (MRET_1234), partial mRNA blastn 13334 291 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
28508680 28508680 PRJNA904835_P_NODE_43587_length_283_cov_0.847619_g43331_i0 PRJNA904835 43587 283 0.847619 2.39876177 Cystobasidium minutum MCA 421 29899 Fungi Fungi 113 1.12e-27   NR XP_066819630.1 1397322 g43331 i0 62.4 1.85512367491166 85 32 90.1 0 282 28 218 302 XP_066819630.1 60S ribosomal protein uL4 [Cystobasidium minutum MCA 4210] diamond 525 113 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium minutum
29266230 29266230 PRJNA904835_P_NODE_54909_length_246_cov_0.890173_g54653_i0 PRJNA904835 54909 246 0.890173 2.18982558 Mycena haematopus 230807 Fungi Fungi 65.1 2.05e-10   NR KAJ7260464.1 230807 g54653 i0 44.4 0.98780487804878 81 45 98.8 0 3 245 43 123 KAJ7260464.1 ras family-domain-containing protein [Mycena haematopus] diamond 243 65.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena haematopus
30845820 30845820 PRJNA904835_P_NODE_59274_length_241_cov_0.916667_g59018_i0 PRJNA904835 59274 241 0.916667 2.20916747 Malassezia restricta CBS 7877 425264 Fungi Fungi 167 6.469999999999999e-52   NR AYO41458.1 425264 g59018 i0 100 0.995850622406639 80 0 99.6 0 2 241 2 81 AYO41458.1 54S ribosomal protein L31, mitochondrial [Malassezia restricta CBS 7877] diamond 240 167 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
31612105 31612105 PRJNA904835_P_NODE_52416_length_249_cov_0.875000_g52160_i0 PRJNA904835 52416 249 0.875 2.17875 Eukaryota 2759 Fungi Fungi 48.1 1.25e-4   NR TFK24803.1 230819 g52160 i0 71 1.90361445783133 31 9 37.3 0 48 140 2 32 TFK24803.1 ankyrin, partial [Coprinopsis marcescibilis] diamond 474 48.5 0.991752577319588 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Psathyrellaceae Coprinopsis Coprinopsis marcescibilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;