RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA904835", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA904835 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7625549 7625549 PRJNA904835_P_NODE_46486_length_269_cov_1.515306_g46230_i0 PRJNA904835 46486 269 1.515306 4.07617314 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 120 1.91e-29   NR XP_004039325.1 5932 g46230 i0 62.5 7.6728624535316 88 33 98.1 0 1 264 326 413 XP_004039325.1 papain family cysteine protease, putative [Ichthyophthirius multifiliis] diamond 2064 120 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
14910595 14910595 PRJNA904835_P_NODE_23272_length_415_cov_0.801170_g23017_i0 PRJNA904835 23272 415 0.80117 3.3248555 Isotricha intestinalis 47897 SAR_Eukaryotes SAR_Eukaryotes 455 2.6000000000000003e-123   NTclustered gi|92790153|emb|AJ965262.1| 47897 g23017 i0 86.779 198.265060240964 416 46 99 9 5 414 538 126 Isotricha intestinalis partial mRNA for Polyubiqutin 2 (polyubiqutin 2 gene) blastn 82280 455 1 Eukaryota Sar   Ciliophora Litostomatea Vestibuliferida Isotrichidae Isotricha Isotricha intestinalis
14910966 14910966 PRJNA904835_P_NODE_34872_length_328_cov_0.905882_g34616_i0 PRJNA904835 34872 328 0.905882 2.97129296 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 134 2.99e-37   NR XP_004034912.1 5932 g34616 i0 60.6 3.71341463414634 104 40 95.1 1 313 2 2 104 XP_004034912.1 hypothetical protein IMG5_109970 [Ichthyophthirius multifiliis] diamond 1218 134 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
17461756 17461756 PRJNA904835_P_NODE_51614_length_250_cov_0.870056_g51358_i0 PRJNA904835 51614 250 0.870056 2.17514 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 127 2.59e-32   NR XP_001024675.2 312017 g51358 i0 68.7 1.992 83 26 99.6 0 2 250 230 312 XP_001024675.2 aspartyl-tRNA synthetase protein [Tetrahymena thermophila SB210] diamond 498 127 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
25109069 25109069 PRJNA904835_P_NODE_34940_length_327_cov_1.515748_g34684_i0 PRJNA904835 34940 327 1.515748 4.95649596 Oxytricha trifallax 1172189 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.031   NTclustered gi|612176406|gb|KJ573500.1| 1172189 g34684 i0 100 0.0856269113149847 28 0 9 0 230 257 775 802 Oxytricha trifallax strain JRB310 TEBPalpha gene, complete sequence; micronuclear blastn 28 52.8 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Oxytricha Oxytricha trifallax
28635209 28635209 PRJNA904835_P_NODE_8587_length_736_cov_1.613876_g8357_i0 PRJNA904835 8587 736 1.613876 11.87812736 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 76.3 2.9e-13   NR CDW86772.1 5949 g8357 i0 42.6 0.525815217391304 129 65 50.5 5 654 283 15 139 CDW86772.1 UNKNOWN [Stylonychia lemnae] diamond 387 76.3 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28950895 28950895 PRJNA904835_P_NODE_56548_length_244_cov_0.900585_g56292_i0 PRJNA904835 56548 244 0.900585 2.1974274 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 108 2.54e-25   NR XP_004040108.1 5932 g56292 i0 62 1.94262295081967 79 30 97.1 0 239 3 108 186 XP_004040108.1 hypothetical protein IMG5_001810 [Ichthyophthirius multifiliis] diamond 474 108 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
30537388 30537388 PRJNA904835_P_NODE_44513_length_278_cov_1.497561_g44257_i0 PRJNA904835 44513 278 1.497561 4.16321958 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 130 7.21e-35   NR CAD8077690.1 5886 g44257 i0 67.8 3.82014388489209 90 29 97.1 0 273 4 147 236 CAD8077690.1 unnamed protein product [Paramecium primaurelia] diamond 1062 130 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;