RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA904835", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA904835 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27719754 27719754 PRJNA904835_P_NODE_57244_length_243_cov_0.905882_g56988_i0 PRJNA904835 57244 243 0.905882 2.20129326 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 46.2 0.00221   NR XP_068355083.1 1144522 g56988 i0 31.1 0.91358024691358 74 34 86.4 2 243 34 183 243 XP_068355083.1 uncharacterized protein TRFO_31142 [Tritrichomonas foetus] diamond 222 46.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28477081 28477081 PRJNA904835_P_NODE_43246_length_284_cov_1.412322_g42990_i0 PRJNA904835 43246 284 1.412322 4.01099448 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 44.3 0.018   NR XP_068369377.1 1144522 g42990 i0 31 1.78521126760563 100 57 96.1 4 3 275 996 1092 XP_068369377.1 uncharacterized protein TRFO_41941 [Tritrichomonas foetus] diamond 507 44.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;