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contig_metadata

6 rows where bioproject = "PRJNA904835" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA904835 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2158956 2158956 PRJNA904835_P_NODE_53062_length_248_cov_0.880000_g52806_i0 PRJNA904835 53062 248 0.88 2.1824 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 134 5.05e-35   NR MDD3720547.1 2044595 g52806 i0 73.2 4.94758064516129 82 22 99.2 0 247 2 92 173 MDD3720547.1 lysine--tRNA ligase [Candidatus Altimarinota bacterium] diamond 1227 134 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27782558 27782558 PRJNA904835_P_NODE_58884_length_241_cov_0.916667_g58628_i0 PRJNA904835 58884 241 0.916667 2.20916747 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 97.1 2.13e-21   NR MBW7954251.1 2044595 g58628 i0 61 0.95850622406639 77 30 95.9 0 3 233 25 101 MBW7954251.1 MiaB/RimO family radical SAM methylthiotransferase [Candidatus Altimarinota bacterium] diamond 231 97.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28918893 28918893 PRJNA904835_P_NODE_16828_length_501_cov_1.079439_g16574_i0 PRJNA904835 16828 501 1.079439 5.40798939 Parcubacteria bacterium C7867- 2762014 Bacteria Bacteria 48.5 0.00402   NR KND51986.1 1659195 g16574 i0 26.1 0.688622754491018 115 76 67.7 4 411 73 15 122 KND51986.1 MAG: hypothetical protein ABA06_01850 [Parcubacteria bacterium C7867-001] diamond 345 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-001
30182190 30182190 PRJNA904835_P_NODE_44212_length_280_cov_1.077295_g43956_i0 PRJNA904835 44212 280 1.077295 3.016426 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 57.4 4.03e-7   NR MBA2307283.1 2030827 g43956 i0 63.9 0.782142857142857 36 13 38.6 0 280 173 60 95 MBA2307283.1 sel1 repeat family protein [Candidatus Dependentiae bacterium] diamond 219 57.4 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
30561175 30561175 PRJNA904835_P_NODE_51553_length_250_cov_0.870056_g51297_i0 PRJNA904835 51553 250 0.870056 2.17514 Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_ 2282145 Bacteria Bacteria 43.5 0.00411   NR OGG26561.1 1798388 g51297 i0 48.6 0.42 35 18 42 0 202 98 52 86 OGG26561.1 MAG: hypothetical protein A2960_03700 [Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_39_12b] diamond 105 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Gottesmaniibacteriota         Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_39_12b
32679350 32679350 PRJNA904835_P_NODE_16980_length_498_cov_1.912941_g16726_i0 PRJNA904835 16980 498 1.912941 9.52644618 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 50.4 7.42e-4   NR PCI24648.1 2030811 g16726 i0 36.5 0.379518072289157 63 38 36.7 1 272 454 116 178 PCI24648.1 MAG: hypothetical protein COB57_04520 [Candidatus Peregrinibacteria bacterium] diamond 189 50.4 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;