RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA902848" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA902848 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1247094 1247094 PRJNA902848_P_NODE_5721_length_353_cov_9.642857_g5671_i0 PRJNA902848 5721 353 9.642857 34.03928521 Haplosclerida 6049 Porifera other_Eukaryota 121 9.02e-23   NTclustered gi|1284883228|gb|KY825184.1| 178514 g5671 i0 79.885 8.54674220963173 174 28 48 5 4 174 3305 3474 Amphimedon compressa voucher MNRJ:18771 internal transcribed spacer 2 and 28S ribosomal RNA gene, partial sequence blastn 3017 121 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon compressa
32711012 32711012 PRJNA902848_P_NODE_19960_length_242_cov_0.923077_g19910_i0 PRJNA902848 19960 242 0.923077 2.23384634 Corticium candelabrum 121492 Porifera other_Eukaryota 63.5 1.05e-9   NR XP_062507398.1 121492 g19910 i0 44.6 2.71487603305785 74 38 88 1 6 218 125 198 XP_062507398.1 large ribosomal subunit protein uL15-like [Corticium candelabrum] diamond 657 63.5 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;