RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA902848", tax_phylum = "Nanobdellota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Nanobdellota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA902848 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9809823 9809823 PRJNA902848_P_NODE_14868_length_250_cov_0.881356_g14818_i0 PRJNA902848 14868 250 0.881356 2.20339 Nanobdellota archaeon 2026764 Archaea Archaea 153 1.9499999999999998e-42   NR MDP3881745.1 2026764 g14818 i0 82.9 0.984 82 14 98.4 0 246 1 256 337 MDP3881745.1 aspartate--tRNA ligase [Nanoarchaeota archaeon] diamond 246 153 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
27466810 27466810 PRJNA902848_P_NODE_14403_length_251_cov_0.876404_g14353_i0 PRJNA902848 14403 251 0.876404 2.19977404 Nanobdellota archaeon 2026764 Archaea Archaea 84.7 7.03e-17   NR MFC1800567.1 2026764 g14353 i0 48.2 0.99203187250996006 83 42 99.2 1 250 2 285 366 MFC1800567.1 FG-GAP-like repeat-containing protein [Nanoarchaeota archaeon] diamond 249 84.7 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29463033 29463033 PRJNA902848_P_NODE_18370_length_245_cov_0.906977_g18320_i0 PRJNA902848 18370 245 0.906977 2.22209365 Nanobdellati 1783276 Archaea Archaea 112 1.17e-26   NR MBU1643590.1 2026764 g18320 i0 67.9 8.62040816326531 78 25 95.5 0 10 243 340 417 MBU1643590.1 DNA topoisomerase I [Nanoarchaeota archaeon] diamond 2112 112 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
30751028 30751028 PRJNA902848_P_NODE_17654_length_246_cov_0.901734_g17604_i0 PRJNA902848 17654 246 0.901734 2.21826564 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 117 6.679999999999999e-31   NR MDP4012162.1 2910166 g17604 i0 71.6 3.95121951219512 81 23 98.8 0 245 3 97 177 MDP4012162.1 MFS transporter [Candidatus Nanoarchaeia archaeon] diamond 972 117 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;