RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA902848" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA902848 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29866341 29866341 PRJNA902848_P_NODE_15891_length_249_cov_0.886364_g15841_i0 PRJNA902848 15891 249 0.886364 2.20704636 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00322   NR KAL3786592.1 29204 g15841 i0 40.8 0.590361445783133 49 29 59 0 240 94 71 119 KAL3786592.1 hypothetical protein HJC23_008188 [Cyclotella cryptica] diamond 147 44.7 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
31825711 31825711 PRJNA902848_P_NODE_18937_length_244_cov_0.912281_g18887_i0 PRJNA902848 18937 244 0.912281 2.22596564 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 65.5 3.86e-10   NR GFH49333.1 426638 g18887 i0 40.3 0.94672131147541 77 42 94.7 1 231 1 2770 2842 GFH49333.1 hypothetical protein CTEN210_05809 [Chaetoceros tenuissimus] diamond 231 65.5 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;