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contig_metadata

3 rows where bioproject = "PRJNA902848", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

  • Methanobacteriati · 3 ✖

bioproject 1

  • PRJNA902848 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27561170 27561170 PRJNA902848_P_NODE_17564_length_246_cov_0.901734_g17514_i0 PRJNA902848 17564 246 0.901734 2.21826564 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 141 5.569999999999999e-38   NR HIH77024.1 1906667 g17514 i0 90 0.975609756097561 80 8 97.6 0 3 242 118 197 HIH77024.1 acetyl-CoA decarbonylase/synthase complex subunit gamma [Methanomassiliicoccales archaeon] diamond 240 141 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
29179406 29179406 PRJNA902848_P_NODE_16549_length_248_cov_0.891429_g16499_i0 PRJNA902848 16549 248 0.891429 2.21074392 Methanobacteriati 3366610 Archaea Archaea 156 1.49e-42   NR MBE3137818.1 1906666 g16499 i0 87.8 5.91532258064516 82 10 99.2 0 3 248 272 353 MBE3137818.1 RiPP maturation radical SAM C-methyltransferase [Thermoplasmata archaeon] diamond 1467 157 0.993630573248408 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32269011 32269011 PRJNA902848_P_NODE_18018_length_245_cov_0.906977_g17968_i0 PRJNA902848 18018 245 0.906977 2.22209365 Thermoplasmatota archaeon 2806419 Archaea Archaea 121 7.57e-33   NR MCU0799625.1 2806419 g17968 i0 88.2 0.83265306122449 68 8 83.3 0 204 1 1 68 MCU0799625.1 hypothetical protein [Thermoplasmatota archaeon] diamond 204 121 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;