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contig_metadata

24 rows where bioproject = "PRJNA902848" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 24 ✖

bioproject 1

  • PRJNA902848 · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1246963 1246963 PRJNA902848_P_NODE_15521_length_249_cov_0.886364_g15471_i0 PRJNA902848 15521 249 0.886364 2.20704636 Methanothrix 2222 Archaea Archaea 460 3.16e-125   NTclustered gi|2133328945|gb|CP086219.1| 90426 g15471 i0 100 2 249 0 100 0 1 249 582306 582554 MAG: Methanothrix sp. isolate MAG 281 chromosome blastn 498 460 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
2157270 2157270 PRJNA902848_P_NODE_14382_length_251_cov_0.876404_g14332_i0 PRJNA902848 14382 251 0.876404 2.19977404 Methanobacteriota archaeon 2026739 Archaea Archaea 193 1.28e-44   NTclustered gi|2108123351|gb|CP070732.1| 2026739 g14332 i0 80.632 10.5298804780876 253 45 100 4 1 251 613956 613706 MAG: Methanobacteriota archaeon isolate bin41 chromosome blastn 2643 193 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
3432569 3432569 PRJNA902848_P_NODE_14923_length_250_cov_0.881356_g14873_i0 PRJNA902848 14923 250 0.881356 2.20339 Methanobacterium aridiramus 2584467 Archaea Archaea 327 3.36e-85   NTclustered gi|2523005876|gb|CP040735.1| 2584467 g14873 i0 90.476 5.548 252 19 99 3 3 250 1232346 1232096 Methanobacterium aridiramus strain CWC-01 chromosome, complete genome blastn 1387 327 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium aridiramus
7260066 7260066 PRJNA902848_P_NODE_17666_length_246_cov_0.901734_g17616_i0 PRJNA902848 17666 246 0.901734 2.21826564 Methanosarcina hadiensis 3078083 Archaea Archaea 187 5.839999999999998e-43   NTclustered gi|2878048566|gb|CP136241.1| 3078083 g17616 i0 81.466 11.1951219512195 232 39 94 4 8 238 3288533 3288305 Methanosarcina hadiensis strain TD41E1-1 chromosome, complete genome blastn 2754 187 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina hadiensis
10175584 10175584 PRJNA902848_P_NODE_19428_length_243_cov_0.917647_g19378_i0 PRJNA902848 19428 243 0.917647 2.22988221 Methanothrix 2222 Archaea Archaea 388 1.47e-103   NTclustered gi|2133328945|gb|CP086219.1| 90426 g19378 i0 95.492 2.0082304526749 244 9 100 2 1 243 1800724 1800482 MAG: Methanothrix sp. isolate MAG 281 chromosome blastn 488 388 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
11450667 11450667 PRJNA902848_P_NODE_12369_length_259_cov_1.306452_g12319_i0 PRJNA902848 12369 259 1.306452 3.38371068 Natronomonadaceae 3402413 Archaea Archaea 211 3.68e-50   NTclustered gi|1865519430|gb|CP058335.1| 1710540 g12319 i0 81.712 104.907335907336 257 43 98 4 1 255 1513402 1513148 Natronomonas salina strain YPL13 chromosome, complete genome blastn 27171 211 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas salina
21284168 21284168 PRJNA902848_P_NODE_9377_length_292_cov_1.351598_g9327_i0 PRJNA902848 9377 292 1.351598 3.94666616 Methanospirillum hungatei 2203 Archaea Archaea 303 6.77e-78   NTclustered gi|88186784|gb|CP000254.1| 323259 g9327 i0 86.765 0.931506849315068 272 36 93 0 21 292 534594 534865 Methanospirillum hungatei JF-1, complete genome blastn 272 303 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum hungatei
22558871 22558871 PRJNA902848_P_NODE_17618_length_246_cov_0.901734_g17568_i0 PRJNA902848 17618 246 0.901734 2.21826564 Methanothrix sp. 90426 Archaea Archaea 142 4.69e-40   NR MDD4162723.1 90426 g17568 i0 88.9 2.96341463414634 81 9 98.8 0 245 3 107 187 MDD4162723.1 arsenite methyltransferase [Methanothrix sp.] diamond 729 142 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
27529788 27529788 PRJNA902848_P_NODE_18843_length_244_cov_0.912281_g18793_i0 PRJNA902848 18843 244 0.912281 2.22596564 Methanoregulaceae archaeon 2485498 Archaea Archaea 52.4 1.48e-5   NR HNW81227.1 2485498 g18793 i0 39.4 5.23770491803279 71 40 87.3 1 224 12 76 143 HNW81227.1 PKD domain-containing protein [Methanoregulaceae archaeon] diamond 1278 52.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
27561170 27561170 PRJNA902848_P_NODE_17564_length_246_cov_0.901734_g17514_i0 PRJNA902848 17564 246 0.901734 2.21826564 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 141 5.569999999999999e-38   NR HIH77024.1 1906667 g17514 i0 90 0.975609756097561 80 8 97.6 0 3 242 118 197 HIH77024.1 acetyl-CoA decarbonylase/synthase complex subunit gamma [Methanomassiliicoccales archaeon] diamond 240 141 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
27845379 27845379 PRJNA902848_P_NODE_20424_length_242_cov_0.911243_g20374_i0 PRJNA902848 20424 242 0.911243 2.20520806 Methanospirillum sp. J.3.6.1-F.2.7.3 2834276 Archaea Archaea 147 2.88e-39   NR WP_372238735.1 2834276 g20374 i0 91.3 0.991735537190083 80 7 99.2 0 1 240 97 176 WP_372238735.1 DNA-directed RNA polymerase subunit A'' [Methanospirillum purgamenti] diamond 240 147 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum purgamenti
28382307 28382307 PRJNA902848_P_NODE_14546_length_251_cov_0.876404_g14496_i0 PRJNA902848 14546 251 0.876404 2.19977404 Methanosarcinales archaeon 2250255 Archaea Archaea 159 5.29e-47   NR NYT10178.1 2250255 g14496 i0 91.6 2.97609561752988 83 7 99.2 0 249 1 6 88 NYT10178.1 class I SAM-dependent methyltransferase [Methanosarcinales archaeon] diamond 747 159 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
29179406 29179406 PRJNA902848_P_NODE_16549_length_248_cov_0.891429_g16499_i0 PRJNA902848 16549 248 0.891429 2.21074392 Methanobacteriati 3366610 Archaea Archaea 156 1.49e-42   NR MBE3137818.1 1906666 g16499 i0 87.8 5.91532258064516 82 10 99.2 0 3 248 272 353 MBE3137818.1 RiPP maturation radical SAM C-methyltransferase [Thermoplasmata archaeon] diamond 1467 157 0.993630573248408 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29273793 29273793 PRJNA902848_P_NODE_14709_length_251_cov_0.876404_g14659_i0 PRJNA902848 14709 251 0.876404 2.19977404 Archaea 2157 Archaea Archaea 170 1.41e-50   NR OPZ42339.1 1852879 g14659 i0 91.6 6.94422310756972 83 7 99.2 0 251 3 74 156 OPZ42339.1 MAG: long-chain-fatty-acid--CoA ligase [Euryarchaeota archaeon ADurb.BinA087] diamond 1743 171 0.994152046783626 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon ADurb.BinA087
29581779 29581779 PRJNA902848_P_NODE_20370_length_242_cov_0.923077_g20320_i0 PRJNA902848 20370 242 0.923077 2.23384634 Methanoregula sp. 2052170 Archaea Archaea 75.1 8.35e-14   NR MFA4826370.1 2052170 g20320 i0 85.7 0.520661157024793 42 6 52.1 0 117 242 42 83 MFA4826370.1 type II CAAX endopeptidase family protein [Methanoregula sp.] diamond 126 75.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
30782539 30782539 PRJNA902848_P_NODE_20134_length_242_cov_0.923077_g20084_i0 PRJNA902848 20134 242 0.923077 2.23384634 Methanothrix sp. 90426 Archaea Archaea 147 8.07e-40   NR MBP7071201.1 90426 g20084 i0 96.3 1.98347107438017 80 3 99.2 0 1 240 291 370 MBP7071201.1 potassium/proton antiporter [Methanothrix sp.] diamond 480 147 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
30972240 30972240 PRJNA902848_P_NODE_14494_length_251_cov_0.876404_g14444_i0 PRJNA902848 14494 251 0.876404 2.19977404 Methanobacteriota archaeon 2026739 Archaea Archaea 48.5 3.79e-4   NR MBI2077356.1 2026739 g14444 i0 42.2 0.764940239043825 64 35 74.1 2 231 46 474 537 MBI2077356.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Methanobacteriota archaeon] diamond 192 48.5 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31035626 31035626 PRJNA902848_P_NODE_15515_length_249_cov_0.886364_g15465_i0 PRJNA902848 15515 249 0.886364 2.20704636 Methanofollis ethanolicus 488124 Archaea Archaea 44.7 0.00847   NR WP_067051216.1 488124 g15465 i0 35.5 0.91566265060241 76 42 91.6 1 21 248 148 216 WP_067051216.1 bifunctional RecB family nuclease/DEAD/DEAH box helicase [Methanofollis ethanolicus] diamond 228 44.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanofollis Methanofollis ethanolicus
31383178 31383178 PRJNA902848_P_NODE_15536_length_249_cov_0.886364_g15486_i0 PRJNA902848 15536 249 0.886364 2.20704636 Methanofastidiosum sp. 2666341 Archaea Archaea 159 7.189999999999998e-47   NR MFA5559172.1 2666341 g15486 i0 93.8 2.92771084337349 81 5 97.6 0 245 3 61 141 MFA5559172.1 HD domain-containing protein [Methanofastidiosum sp.] diamond 729 159 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.
31422255 31422255 PRJNA902848_P_NODE_13096_length_253_cov_0.866667_g13046_i0 PRJNA902848 13096 253 0.866667 2.19266751 Archaea 2157 Archaea Archaea 117 1.33e-28   NR TET02550.1 2250276 g13046 i0 66.7 1.99209486166008 84 28 99.6 0 253 2 390 473 TET02550.1 MAG: YgiQ family radical SAM protein [Hadesarchaea archaeon] diamond 504 117 1 Archaea   Methanobacteriati Candidatus Hadarchaeota Candidatus Hadarchaeia       Hadesarchaea archaeon
31509746 31509746 PRJNA902848_P_NODE_18136_length_245_cov_0.906977_g18086_i0 PRJNA902848 18136 245 0.906977 2.22209365 Methanobacterium sp. 2164 Archaea Archaea 127 7.45e-36   NR MTK63400.1 2164 g18086 i0 82.2 0.893877551020408 73 13 89.4 0 221 3 1 73 MTK63400.1 pyridoxamine 5'-phosphate oxidase [Methanobacterium sp.] diamond 219 127 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
32269010 32269010 PRJNA902848_P_NODE_17818_length_246_cov_0.901734_g17768_i0 PRJNA902848 17818 246 0.901734 2.21826564 Methanoregula sp. 2052170 Archaea Archaea 159 5.09e-46   NR HSQ93991.1 2052170 g17768 i0 97.6 2 82 2 100 0 246 1 70 151 HSQ93991.1 tRNA(Ile2) 2-agmatinylcytidine synthetase [Methanoregula sp.] diamond 492 159 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
32269011 32269011 PRJNA902848_P_NODE_18018_length_245_cov_0.906977_g17968_i0 PRJNA902848 18018 245 0.906977 2.22209365 Thermoplasmatota archaeon 2806419 Archaea Archaea 121 7.57e-33   NR MCU0799625.1 2806419 g17968 i0 88.2 0.83265306122449 68 8 83.3 0 204 1 1 68 MCU0799625.1 hypothetical protein [Thermoplasmatota archaeon] diamond 204 121 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
32718690 32718690 PRJNA902848_P_NODE_19360_length_243_cov_0.917647_g19310_i0 PRJNA902848 19360 243 0.917647 2.22988221 Methanobacteriota 28890 Archaea Archaea 48.1 3.5e-4   NR RLF95751.1 2250254 g19310 i0 74.1 1.33333333333333 27 7 33.3 0 82 2 143 169 RLF95751.1 MAG: SAM-dependent tRNA/rRNA cytosine-C5 methylase, partial [Thermococci archaeon] diamond 324 48.1 1 Archaea   Methanobacteriati Methanobacteriota Thermococci       Thermococci archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;