RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA902848", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA902848 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
881943 881943 PRJNA902848_P_NODE_13941_length_252_cov_0.871508_g13891_i0 PRJNA902848 13941 252 0.871508 2.19620016 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 217 7.659999999999999e-52   NTclustered gi|2874254090|emb|OY970173.1| 2053570 g13891 i0 83.471 5.66666666666667 242 31 96 4 2 243 602485 602717 MAG: Candidatus Latescibacteria bacterium isolate MFD02242.bin.1.32 genome assembly, chromosome: 1 blastn 1428 217 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
3799034 3799034 PRJNA902848_P_NODE_2263_length_496_cov_2.030733_g2213_i0 PRJNA902848 2263 496 2.030733 10.07243568 Pseudomonadati 3379134 Bacteria Bacteria 271 1.6599999999999996e-87   NR MDP6039535.1 2053570 g2213 i0 76.2 18.883064516129 164 39 99.2 0 4 495 218 381 MDP6039535.1 phosphoenolpyruvate carboxykinase (ATP) [Candidatus Latescibacterota bacterium] diamond 9366 271 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
12360853 12360853 PRJNA902848_P_NODE_13350_length_253_cov_0.866667_g13300_i0 PRJNA902848 13350 253 0.866667 2.19266751 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 185 2.1699999999999998e-42   NTclustered gi|2874254090|emb|OY970173.1| 2053570 g13300 i0 79.842 92.2450592885375 253 51 100 0 1 253 1774556 1774808 MAG: Candidatus Latescibacteria bacterium isolate MFD02242.bin.1.32 genome assembly, chromosome: 1 blastn 23338 185 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29210990 29210990 PRJNA902848_P_NODE_11929_length_263_cov_1.473684_g11879_i0 PRJNA902848 11929 263 1.473684 3.87578892 Pseudomonadati 3379134 Bacteria Bacteria 49.3 2.33e-4   NR MFC1526697.1 2053570 g11879 i0 32.4 1.46007604562738 68 45 77.6 1 222 19 248 314 MFC1526697.1 formylglycine-generating enzyme family protein [Candidatus Latescibacterota bacterium] diamond 384 49.3 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;