RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA902848", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Woeseibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA902848 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1246956 1246956 PRJNA902848_P_NODE_14661_length_251_cov_0.876404_g14611_i0 PRJNA902848 14661 251 0.876404 2.19977404 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 138 5.32e-40   NR HPT65785.1 2026804 g14611 i0 88 2.96414342629482 83 10 99.2 0 251 3 35 117 HPT65785.1 30S ribosomal protein S13 [Candidatus Woesebacteria bacterium] diamond 744 138 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
26992378 26992378 PRJNA902848_P_NODE_20102_length_242_cov_0.923077_g20052_i0 PRJNA902848 20102 242 0.923077 2.23384634 Candidatus Woesebacteria bacterium GW2 2026804 Bacteria Bacteria 114 2.21e-27   NR KKQ73645.1 1618568 g20052 i0 73.4 1.97107438016529 79 21 97.9 0 6 242 51 129 KKQ73645.1 MAG: ATP-dependent zinc metalloprotease FtsH [Candidatus Woesebacteria bacterium GW2011_GWB1_38_5] diamond 477 114 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium GW2011_GWB1_38_5
31573012 31573012 PRJNA902848_P_NODE_15436_length_249_cov_0.886364_g15386_i0 PRJNA902848 15436 249 0.886364 2.20704636 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 151 4.27e-41   NR MCA9373331.1 2026804 g15386 i0 89 0.987951807228916 82 9 98.8 0 2 247 474 555 MCA9373331.1 cytochrome c biogenesis protein DipZ [Candidatus Woesebacteria bacterium] diamond 246 151 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;