RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA902848", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA902848 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28887367 28887367 PRJNA902848_P_NODE_17428_length_246_cov_0.901734_g17378_i0 PRJNA902848 17428 246 0.901734 2.21826564 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 63.9 1.09e-9   NR RKU24088.1 2026781 g17378 i0 49.3 1.68292682926829 69 18 63.4 1 245 90 49 117 RKU24088.1 MAG: hypothetical protein C6499_17425, partial [Candidatus Poribacteria bacterium] diamond 414 63.9 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31327329 31327329 PRJNA902848_P_NODE_20395_length_242_cov_0.923077_g20345_i0 PRJNA902848 20395 242 0.923077 2.23384634 Bacillati 1783272 Bacteria Bacteria 134 2.6499999999999996e-35   NR MBI1923176.1 2026781 g20345 i0 86.3 2.93801652892562 80 11 99.2 0 240 1 211 290 MBI1923176.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 711 134 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;