RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA902848", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 5 ✖

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA902848 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27087547 27087547 PRJNA902848_P_NODE_13042_length_253_cov_0.866667_g12992_i0 PRJNA902848 13042 253 0.866667 2.19266751 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 61.6 1.07e-9   NR MFN2425395.1 2838779 g12992 i0 91.4 0.8300395256917 35 3 41.5 0 148 252 1 35 MFN2425395.1 Holliday junction resolvase RuvX [Candidatus Binatia bacterium] diamond 210 61.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29045499 29045499 PRJNA902848_P_NODE_19308_length_243_cov_0.917647_g19258_i0 PRJNA902848 19308 243 0.917647 2.22988221 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 155 4.939999999999999e-42   NR HET9917911.1 2838779 g19258 i0 97.5 2 81 2 100 0 243 1 512 592 HET9917911.1 efflux RND transporter permease subunit [Candidatus Binatia bacterium] diamond 486 155 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29834696 29834696 PRJNA902848_P_NODE_17991_length_245_cov_0.906977_g17941_i0 PRJNA902848 17991 245 0.906977 2.22209365 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 149 1.77e-40   NR HWX19731.1 2838779 g17941 i0 86.4 4.9469387755102 81 11 99.2 0 243 1 355 435 HWX19731.1 alpha-L-fucosidase [Candidatus Binatia bacterium] diamond 1212 149 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31074567 31074567 PRJNA902848_P_NODE_15535_length_249_cov_0.886364_g15485_i0 PRJNA902848 15535 249 0.886364 2.20704636 Bacteria 2 Bacteria Bacteria 134 7.379999999999998e-35   NR MDP9129410.1 2528255 g15485 i0 78.3 2 83 18 100 0 1 249 168 250 MDP9129410.1 ATP-dependent DNA ligase [Candidatus Binatota bacterium] diamond 498 135 0.992592592592593 Bacteria Bacteria candidate phyla   Candidatus Binatota         Candidatus Binatota bacterium
31351508 31351508 PRJNA902848_P_NODE_14876_length_250_cov_0.881356_g14826_i0 PRJNA902848 14876 250 0.881356 2.20339 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 130 8.029999999999999e-38   NR HEV7731063.1 2838779 g14826 i0 97.1 0.816 68 2 81.6 0 47 250 1 68 HEV7731063.1 hypothetical protein [Candidatus Binatia bacterium] diamond 204 130 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;