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contig_metadata

19 rows where bioproject = "PRJNA902848" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 19 ✖

bioproject 1

  • PRJNA902848 · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11085572 11085572 PRJNA902848_P_NODE_16009_length_248_cov_3.542857_g15959_i0 PRJNA902848 16009 248 3.542857 8.78628536 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 274 4.399999999999999e-69   NTclustered gi|470421212|ref|XM_004337322.1| 1257118 g15959 i0 89.401 79.4879032258064 217 23 88 0 1 217 217 1 Acanthamoeba castellanii str. Neff actin, putative (ACA1_328920), partial mRNA blastn 19713 274 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16184714 16184714 PRJNA902848_P_NODE_14253_length_251_cov_0.876404_g14203_i0 PRJNA902848 14253 251 0.876404 2.19977404 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 81.3 6.82e-16   NR XP_012755419.1 1410327 g14203 i0 41 1.9840637450199201 83 49 99.2 0 251 3 259 341 XP_012755419.1 hypothetical protein SAMD00019534_044750 [Acytostelium subglobosum LB1] diamond 498 81.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
17460205 17460205 PRJNA902848_P_NODE_18854_length_244_cov_0.912281_g18804_i0 PRJNA902848 18854 244 0.912281 2.22596564 Eumycetozoa 142796 Evosea other_Eukaryota 142 7.08e-39   NR XP_003294367.1 5786 g18804 i0 81.3 6.88524590163934 80 15 98.4 0 2 241 94 173 XP_003294367.1 uncharacterized protein DICPUDRAFT_51465 [Dictyostelium purpureum] diamond 1680 142 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
21283908 21283908 PRJNA902848_P_NODE_1577_length_567_cov_1.836032_g1528_i0 PRJNA902848 1577 567 1.836032 10.41030144 Vannella sp. 1973054 Discosea other_Eukaryota 990 0   NTclustered gi|1376098864|gb|MH182996.1| 1973054 g1528 i0 97.887 89.8130511463845 568 11 100 1 1 567 1274 707 Vannella sp. isolate DD141 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 50924 990 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp.
21284117 21284117 PRJNA902848_P_NODE_7037_length_328_cov_1.223529_g6987_i0 PRJNA902848 7037 328 1.223529 4.01317512 Vannella simplex 197532 Discosea other_Eukaryota 601 2.4399999999999998e-167   NTclustered gi|25991989|gb|AF486078.1| 197532 g6987 i0 99.695 100.917682926829 328 1 100 0 1 328 426 99 Vannella simplex isolate 51 small subunit ribosomal RNA gene, partial sequence blastn 33101 601 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
21284162 21284162 PRJNA902848_P_NODE_9177_length_295_cov_1.405405_g9127_i0 PRJNA902848 9177 295 1.405405 4.14594475 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 159 8.11e-43   NR PRP85693.1 1890364 g9127 i0 80.6 2.77627118644068 93 18 94.6 0 284 6 2385 2477 PRP85693.1 hypothetical protein PROFUN_06527 [Planoprotostelium fungivorum] diamond 819 159 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
22559031 22559031 PRJNA902848_P_NODE_5058_length_370_cov_1.303030_g5008_i0 PRJNA902848 5058 370 1.30303 4.821211 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 300 1.14e-76   NTclustered gi|470455615|ref|XM_004340928.1| 1257118 g5008 i0 83.974 74.7054054054054 312 50 84 0 59 370 417 106 Acanthamoeba castellanii str. Neff ribosomal protein S23 (S12), putative (ACA1_232480), partial mRNA blastn 27641 300 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23834027 23834027 PRJNA902848_P_NODE_13059_length_253_cov_0.866667_g13009_i0 PRJNA902848 13059 253 0.866667 2.19266751 Acytostelium subglobosum 361139 Evosea other_Eukaryota 193 1.3e-44   NTclustered gi|831757828|ref|XM_012893698.1| 1410327 g13009 i0 82.222 0.889328063241107 225 38 89 2 5 228 1137 914 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 225 193 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
25108100 25108100 PRJNA902848_P_NODE_3200_length_439_cov_1.377049_g3150_i0 PRJNA902848 3200 439 1.377049 6.04524511 Heterostelium album PN5 2086695 Evosea other_Eukaryota 184 1.94e-56   NR XP_020428647.1 670386 g3150 i0 70.1 1.92710706150342 144 41 98.4 1 6 437 9 150 XP_020428647.1 S60 ribosomal protein L17 [Heterostelium album PN500] diamond 846 184 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
27024183 27024183 PRJNA902848_P_NODE_16342_length_248_cov_0.891429_g16292_i0 PRJNA902848 16342 248 0.891429 2.21074392 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 62.4 4.72e-9   NR PRP87603.1 1890364 g16292 i0 50.9 0.689516129032258 57 28 69 0 77 247 570 626 PRP87603.1 putative Xaa-Pro aminopeptidase 3 [Planoprotostelium fungivorum] diamond 171 62.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27024188 27024188 PRJNA902848_P_NODE_2262_length_496_cov_2.449173_g2212_i0 PRJNA902848 2262 496 2.449173 12.14789808 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 174 4.61e-52   NR XP_004352065.1 1257118 g2212 i0 55.6 2.93951612903226 162 72 98 0 7 492 1 162 XP_004352065.1 ribosomal protein S7e, putative [Acanthamoeba castellanii str. Neff] diamond 1458 174 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27845376 27845376 PRJNA902848_P_NODE_10904_length_275_cov_1.153465_g10854_i0 PRJNA902848 10904 275 1.153465 3.17202875 Corallomyxa tenera 438413 Root_unresolved Root_unresolved 136 8.540000000000001e-36   NR ADK26623.1 438413 g10854 i0 71.9 0.970909090909091 89 25 97.1 0 275 9 286 374 ADK26623.1 elongation factor 2, partial [Corallomyxa tenera] diamond 267 136 1 Eukaryota Amoebozoa           Corallomyxa Corallomyxa tenera
28003637 28003637 PRJNA902848_P_NODE_8465_length_305_cov_1.344828_g8415_i0 PRJNA902848 8465 305 1.344828 4.1017254 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 90.5 2.89e-19   NR KAH3764570.1 1580589 g8415 i0 59 0.816393442622951 83 31 80.7 2 296 51 196 276 KAH3764570.1 RRM domain [Pelomyxa schiedti] diamond 249 90.5 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28414011 28414011 PRJNA902848_P_NODE_15206_length_250_cov_0.881356_g15156_i0 PRJNA902848 15206 250 0.881356 2.20339 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 139 8.16e-41   NR XP_004339588.1 1257118 g15156 i0 85.4 9.84 82 12 98.4 0 246 1 5 86 XP_004339588.1 60S ribosomal protein, putative [Acanthamoeba castellanii str. Neff] diamond 2460 139 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29116239 29116239 PRJNA902848_P_NODE_9548_length_290_cov_1.437788_g9498_i0 PRJNA902848 9548 290 1.437788 4.1695852 root 1 Root_unresolved Root_unresolved 191 4.97e-56   NR NP_042541.1 5755 g9498 i0 93.8 140.027586206897 96 6 99.3 0 3 290 247 342 NP_042541.1 H(+)-transporting ATPasesubunit 1 [Acanthamoeba castellanii] diamond 40608 191 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29992743 29992743 PRJNA902848_P_NODE_2651_length_469_cov_1.176768_g2601_i0 PRJNA902848 2651 469 1.176768 5.51904192 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 132 1.43e-33   NR XP_004341586.1 1257118 g2601 i0 48.5 1.62473347547974 130 64 81.9 2 468 85 272 400 XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] diamond 762 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29992748 29992748 PRJNA902848_P_NODE_7791_length_315_cov_1.057851_g7741_i0 PRJNA902848 7791 315 1.057851 3.33223065 Cavenderia fasciculata 261658 Evosea other_Eukaryota 99 7.94e-24   NR XP_004366312.1 261658 g7741 i0 46.3 1.84761904761905 95 49 90.5 2 31 315 8 100 XP_004366312.1 ubiquitin-conjugating enzyme E2 [Cavenderia fasciculata] diamond 582 99 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30466898 30466898 PRJNA902848_P_NODE_14933_length_250_cov_0.881356_g14883_i0 PRJNA902848 14933 250 0.881356 2.20339 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87.4 5.57e-18   NR XP_004339035.1 1257118 g14883 i0 54.9 0.984 82 37 98.4 0 3 248 292 373 XP_004339035.1 leucine zipperef-hand containing transmembrane protein 1, putative, partial [Acanthamoeba castellanii str. Neff] diamond 246 87.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30529690 30529690 PRJNA902848_P_NODE_13513_length_252_cov_1.508380_g13463_i0 PRJNA902848 13513 252 1.50838 3.8011176 Cavenderia fasciculata 261658 Evosea other_Eukaryota 127 3.83e-36   NR XP_004362999.1 261658 g13463 i0 70.1 2.61904761904762 77 23 91.7 0 233 3 1 77 XP_004362999.1 cytochrome c [Cavenderia fasciculata] diamond 660 127 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;