RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA902515" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA902515 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11450380 11450380 PRJNA902515_P_NODE_6629_length_313_cov_0.975000_g6606_i0 PRJNA902515 6629 313 0.975 3.05175 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 132 4.85e-36   NR MCA9380403.1 2099670 g6606 i0 61 1.00638977635783 105 40 99.7 1 2 313 87 191 MCA9380403.1 uracil-DNA glycosylase [Candidatus Dojkabacteria bacterium] diamond 315 132 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
28982422 28982422 PRJNA902515_P_NODE_15308_length_244_cov_0.912281_g15285_i0 PRJNA902515 15308 244 0.912281 2.22596564 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 139 4.2e-36   NR MBO7720281.1 2026720 g15285 i0 88.8 8.85245901639344 80 8 98.4 1 5 244 612 690 MBO7720281.1 isoleucine--tRNA ligase [Candidatus Saccharibacteria bacterium] diamond 2160 139 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;