RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA900999" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA900999 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
878101 878101 PRJNA900999_S_NODE_3161_length_233_cov_5.034314_g3105_i0 PRJNA900999 3161 233 5.034314 11.72995162 Physella acuta 109671 Mollusca Mollusca 139 1.56e-28   NTclustered gi|2572383300|ref|XM_059312538.1| 109671 g3105 i0 82.692 1.42918454935622 156 27 67 0 44 199 361 516 PREDICTED: Physella acuta small ribosomal subunit protein uS15 (LOC131950409), mRNA blastn 333 139 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
4706689 4706689 PRJNA900999_S_NODE_1444_length_303_cov_23.098540_g1388_i0 PRJNA900999 1444 303 23.09854 69.9885762 Octopus bimaculoides 37653 Mollusca Mollusca 54.7 0.008   NTclustered gi|2427254654|ref|XM_014927064.2| 37653 g1388 i0 100 0.0957095709570957 29 0 10 0 2 30 1008 980 PREDICTED: Octopus bimaculoides probable serine/threonine-protein kinase clkA (LOC106877990), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
5981416 5981416 PRJNA900999_S_NODE_7785_length_164_cov_5.896296_g7729_i0 PRJNA900999 7785 164 5.896296 9.66992544 Metazoa 33208 Mollusca Mollusca 110 2.1e-27   NR XP_052098460.1 6549 g7729 i0 100 300.292682926829 54 0 98.8 0 164 3 186 239 XP_052098460.1 casein kinase I isoform X3 [Mytilus californianus] diamond 49248 110 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
9806011 9806011 PRJNA900999_S_NODE_3988_length_214_cov_4.064865_g3932_i0 PRJNA900999 3988 214 4.064865 8.6988111 Argopecten irradians 31199 Mollusca Mollusca 52.8 0.019   NTclustered gi|2835380130|ref|XM_069264577.1| 31199 g3932 i0 100 0.130841121495327 28 0 13 0 94 121 11144 11171 PREDICTED: Argopecten irradians transforming growth factor beta receptor type 3-like (LOC138321135), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
16180827 16180827 PRJNA900999_S_NODE_533_length_419_cov_16.694872_g479_i0 PRJNA900999 533 419 16.694872 69.95151368 Saccostrea echinata 191078 Mollusca Mollusca 58.4 8.67e-4   NTclustered gi|2628554531|ref|XM_061338703.1| 191078 g479 i0 97.059 0.252983293556086 34 1 8 0 181 214 200 167 PREDICTED: Saccostrea echinata ctenidin-1-like (LOC133202825), mRNA blastn 106 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea echinata
24197497 24197497 PRJNA900999_S_NODE_1259_length_316_cov_22.547038_g1203_i0 PRJNA900999 1259 316 22.547038 71.24864008 Haliotis 6452 Mollusca Mollusca 115 3.72e-21   NTclustered gi|2245692886|ref|XR_006862238.2| 6454 g1203 i0 93.506 5.39556962025316 77 5 24 0 183 259 171 95 PREDICTED: Haliotis rufescens uncharacterized LOC124143021 (LOC124143021), ncRNA blastn 1705 115 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
28453200 28453200 PRJNA900999_S_NODE_7066_length_171_cov_2.859155_g7010_i0 PRJNA900999 7066 171 2.859155 4.88915505 Metazoa 33208 Mollusca Mollusca 115 8.499999999999998e-32   NR XP_055897843.1 6526 g7010 i0 98.2 98.1929824561404 56 1 98.2 0 2 169 50 105 XP_055897843.1 U6 snRNA-associated Sm-like protein LSm6 isoform X1 [Biomphalaria glabrata] diamond 16791 116 0.991379310344828 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;