RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA900999", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA900999 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11081695 11081695 PRJNA900999_S_NODE_4789_length_199_cov_4.505882_g4733_i0 PRJNA900999 4789 199 4.505882 8.96670518 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.017   NTclustered gi|687197630|emb|LN244301.1| 99802 g4733 i0 100 0.14070351758794 28 0 14 0 164 191 172 145 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0050250 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
14906035 14906035 PRJNA900999_S_NODE_2872_length_241_cov_6.485849_g2816_i0 PRJNA900999 2872 241 6.485849 15.63089609 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 424 3.99e-114   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g2816 i0 98.34 75.2738589211618 241 4 100 0 1 241 8707 8947 Stenostomum sthenum mitochondrion, complete genome blastn 18141 424 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;