RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA900999", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA900999 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8530952 8530952 PRJNA900999_S_NODE_3647_length_221_cov_5.604167_g3591_i0 PRJNA900999 3647 221 5.604167 12.38520907 Anneissia japonica 1529436 Echinodermata other_Eukaryota 126 1.1399999999999999e-24   NTclustered gi|1826644552|ref|XM_033254524.1| 1529436 g3591 i0 83.969 3.86877828054299 131 21 59 0 43 173 512 382 PREDICTED: Anneissia japonica 40S ribosomal protein S18 (LOC117111575), mRNA blastn 855 126 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
29116227 29116227 PRJNA900999_S_NODE_4488_length_204_cov_3.988571_g4432_i0 PRJNA900999 4488 204 3.988571 8.13668484 Metazoa 33208 Echinodermata other_Eukaryota 45.4 0.00248   NR XP_063965769.1 7653 g4432 i0 47.6 3.11764705882353 42 22 61.8 0 157 32 682 723 XP_063965769.1 uncharacterized protein LOC135156702 [Lytechinus pictus] diamond 636 45.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;