RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA900999", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 2 ✖

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA900999 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11081703 11081703 PRJNA900999_S_NODE_5889_length_184_cov_3.800000_g5833_i0 PRJNA900999 5889 184 3.8 6.992 Stachyamoeba lipophora 463046 Heterolobosea other_Eukaryota 132 1.96e-26   NTclustered gi|756877602|ref|NC_026312.1| 463046 g5833 i0 81.707 89.2391304347826 164 25 89 5 1 163 1062 903 Stachyamoeba lipophora strain ATCC 50324 culture-collection ATCC:50324 mitochondrion, complete genome blastn 16420 132 1 Eukaryota Discoba   Heterolobosea     Gruberellidae Stachyamoeba Stachyamoeba lipophora
31825678 31825678 PRJNA900999_S_NODE_6517_length_176_cov_558.959184_g6461_i0 PRJNA900999 6517 176 558.959184 983.76816384 Acrasis kona 1008807 Heterolobosea other_Eukaryota 57.4 9.59e-8   NR KAL0485709.1 1008807 g6461 i0 61.4 2.25 44 16 73.3 1 130 2 54 97 KAL0485709.1 kinesin-like calmodulin-binding protein [Acrasis kona] diamond 396 57.4 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;