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contig_metadata

8 rows where bioproject = "PRJNA900028" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA900028 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3425908 3425908 PRJNA900028_P_NODE_18763_length_277_cov_2.719298_g18014_i0 PRJNA900028 18763 277 2.719298 7.53245546 Allovahlkampfia sp. PKD 2011b 1217111 Heterolobosea other_Eukaryota 501 2.11e-137   NTclustered gi|399764159|gb|JQ271670.1| 1217111 g18014 i0 99.278 71.4476534296029 277 2 100 0 1 277 2848 3124 Allovahlkampfia sp. PKD 2011b strain PV66 18S ribosomal RNA gene, partial sequence blastn 19791 501 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011b
3426421 3426421 PRJNA900028_P_NODE_5303_length_465_cov_1.932692_g4564_i0 PRJNA900028 5303 465 1.932692 8.9870178 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 741 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g4564 i0 95.484 27.247311827957 465 19 100 2 1 465 4080 3618 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12670 741 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
8528048 8528048 PRJNA900028_P_NODE_198487_length_159_cov_2.145455_g197738_i0 PRJNA900028 198487 159 2.145455 3.41127345 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 267 4.3199999999999996e-67   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g197738 i0 96.855 58.811320754717 159 5 100 0 1 159 1870 2028 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9351 267 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
12354206 12354206 PRJNA900028_P_NODE_22670_length_261_cov_1.235849_g21921_i0 PRJNA900028 22670 261 1.235849 3.22556589 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 460 3.3399999999999995e-125   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g21921 i0 98.467 3.1264367816092 261 4 100 0 1 261 3325 3585 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 816 460 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
13629859 13629859 PRJNA900028_P_NODE_87391_length_182_cov_0.796992_g86642_i0 PRJNA900028 87391 182 0.796992 1.45052544 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 52.8 0.015   NTclustered gi|2119425873|ref|XM_044699205.1| 51637 g86642 i0 100 0.153846153846154 28 0 15 0 108 135 1133 1160 Naegleria lovaniensis uncharacterized protein (C9374_000906), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
13629984 13629984 PRJNA900028_P_NODE_9611_length_356_cov_2.657980_g8863_i0 PRJNA900028 9611 356 2.65798 9.4624088 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 481 3.63e-131   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g8863 i0 91.036 21.0477528089888 357 31 100 1 1 356 2437 2081 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7493 481 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
20002363 20002363 PRJNA900028_P_NODE_58556_length_198_cov_2.053691_g57807_i0 PRJNA900028 58556 198 2.053691 4.06630818 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 366 5.4e-97   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g57807 i0 100 64.2373737373737 198 0 100 0 1 198 3281 3084 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12719 366 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
23827115 23827115 PRJNA900028_P_NODE_165239_length_163_cov_1.342105_g164490_i0 PRJNA900028 165239 163 1.342105 2.18763115 Allovahlkampfia sp. PKD 2011b 1217111 Heterolobosea other_Eukaryota 300 4.39e-77   NTclustered gi|399764159|gb|JQ271670.1| 1217111 g164490 i0 100 42.0061349693252 162 0 99 0 2 163 2330 2491 Allovahlkampfia sp. PKD 2011b strain PV66 18S ribosomal RNA gene, partial sequence blastn 6847 300 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;