RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA900028", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cressdnaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 2 ✖

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA900028 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
875831 875831 PRJNA900028_P_NODE_6281_length_429_cov_1.342105_g5538_i0 PRJNA900028 6281 429 1.342105 5.75763045 Gemykrogvirus 1985367 Viruses Viruses 734 0   NTclustered gi|2045610848|gb|MW183017.1| 1985367 g5538 i0 98.558 11.8414918414918 416 5 97 1 1 416 1699 2113 MAG: Gemykrogvirus isolate thr147gen1, complete genome blastn 5080 734 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykrogvirus  
15273199 15273199 PRJNA900028_P_NODE_35832_length_228_cov_0.860335_g35083_i0 PRJNA900028 35832 228 0.860335 1.9615638 Genomoviridae 1910928 Viruses Viruses 422 1.34e-113   NTclustered gi|2045610848|gb|MW183017.1| 1985367 g35083 i0 100 7 228 0 100 0 1 228 1019 792 MAG: Gemykrogvirus isolate thr147gen1, complete genome blastn 1596 422 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykrogvirus  

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;