RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA900028", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA900028 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12353859 12353859 PRJNA900028_P_NODE_170790_length_163_cov_0.894737_g170041_i0 PRJNA900028 170790 163 0.894737 1.45842131 Dysidea avara 196820 Porifera other_Eukaryota 56.5 0.001   NTclustered gi|2749538548|ref|XR_010696264.1| 196820 g170041 i0 94.595 1.8159509202454 37 1 22 1 9 44 14388 14424 PREDICTED: Dysidea avara uncharacterized lncRNA (LOC136246146), transcript variant X4, ncRNA blastn 296 56.5 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
32268905 32268905 PRJNA900028_P_NODE_110838_length_171_cov_0.803279_g110089_i0 PRJNA900028 110838 171 0.803279 1.37360709 Halichondria panicea 6063 Porifera other_Eukaryota 44.7 0.00289   NR XP_064390710.1 6063 g110089 i0 54.3 1.2280701754386 35 16 61.4 0 146 42 40 74 XP_064390710.1 espin-like [Halichondria panicea] diamond 210 44.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;