RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA900028", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 11 ✖

tax_kingdom 1

  • Metazoa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA900028 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4702869 4702869 PRJNA900028_P_NODE_106764_length_172_cov_2.219512_g106015_i0 PRJNA900028 106764 172 2.219512 3.81756064 Bradybaena similaris 145626 Mollusca Mollusca 154 3.84e-33   NTclustered gi|2912989933|dbj|AP039594.1| 145626 g106015 i0 91.15 3.42441860465116 113 10 72 0 39 151 30936814 30936926 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 13, sequence blastn 589 154 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
16547084 16547084 PRJNA900028_P_NODE_106813_length_172_cov_2.073171_g106064_i0 PRJNA900028 106813 172 2.073171 3.56585412 Metazoa 33208 Mollusca Mollusca 58.4 3.1e-4   NTclustered gi|2793349872|ref|XR_010955290.1| 109174 g106064 i0 100 14.156976744186 31 0 18 0 142 172 2386 2416 PREDICTED: Haliotis asinina large subunit ribosomal RNA (LOC137270364), rRNA blastn 2435 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
17822397 17822397 PRJNA900028_P_NODE_16054_length_292_cov_3.106996_g15305_i0 PRJNA900028 16054 292 3.106996 9.07242832 Metazoa 33208 Mollusca Mollusca 60.2 1.62e-4   NTclustered gi|2912999747|dbj|AP039606.1| 145626 g15305 i0 88.235 0.541095890410959 51 5 17 1 1 50 15919840 15919890 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 25, sequence blastn 158 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
18726246 18726246 PRJNA900028_P_NODE_155255_length_164_cov_0.886957_g154506_i0 PRJNA900028 155255 164 0.886957 1.45460948 Bradybaena similaris 145626 Mollusca Mollusca 62.1 2.27e-5   NTclustered gi|2912994531|dbj|AP039599.1| 145626 g154506 i0 91.304 1.95731707317073 46 2 28 1 119 164 46230200 46230243 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 18, sequence blastn 321 62.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
20002268 20002268 PRJNA900028_P_NODE_50356_length_207_cov_1.670886_g49607_i0 PRJNA900028 50356 207 1.670886 3.45873402 Bradybaena similaris 145626 Mollusca Mollusca 93.5 1.07e-14   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g49607 i0 82.569 3.70048309178744 109 15 73 4 48 152 28896024 28895916 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 766 93.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
25471972 25471972 PRJNA900028_P_NODE_38100_length_224_cov_1.097143_g37351_i0 PRJNA900028 38100 224 1.097143 2.45760032 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 398 2.2199999999999997e-106   NTclustered gi|2076472537|gb|MZ710040.1| 6465 g37351 i0 98.667 57.4464285714286 225 1 99 1 2 224 1219 995 Patella vulgata voucher LKW089 small subunit ribosomal RNA gene, partial sequence blastn 12868 398 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
26936791 26936791 PRJNA900028_P_NODE_92502_length_179_cov_1.569231_g91753_i0 PRJNA900028 92502 179 1.569231 2.80892349 Metazoa 33208 Mollusca Mollusca 112 6.3200000000000006e-27   NR KAK7094181.1 31220 g91753 i0 88.1 41.5139664804469 59 7 98.9 0 2 178 570 628 KAK7094181.1 hypothetical protein V1264_007837 [Littorina saxatilis] diamond 7431 112 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
28003570 28003570 PRJNA900028_P_NODE_186285_length_162_cov_0.884956_g185536_i0 PRJNA900028 186285 162 0.884956 1.43362872 Dreissena polymorpha 45954 Mollusca Mollusca 50.1 6.1e-6   NR KAH3829362.1 45954 g185536 i0 51.2 0.759259259259259 41 20 75.9 0 9 131 29 69 KAH3829362.1 hypothetical protein DPMN_131358 [Dreissena polymorpha] diamond 123 50.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
28823982 28823982 PRJNA900028_P_NODE_141868_length_165_cov_1.318966_g141119_i0 PRJNA900028 141868 165 1.318966 2.1762939 Mya arenaria 6604 Mollusca Mollusca 41.2 0.0454   NR XP_052816150.1 6604 g141119 i0 40.7 1.07272727272727 59 30 98.2 1 164 3 407 465 XP_052816150.1 uncharacterized protein LOC128242833 isoform X1 [Mya arenaria] diamond 177 41.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
29045401 29045401 PRJNA900028_P_NODE_101588_length_175_cov_1.285714_g100839_i0 PRJNA900028 101588 175 1.285714 2.2499995 Magallana gigas 29159 Mollusca Mollusca 82 2.15e-16   NR XP_065940897.1 29159 g100839 i0 67.3 0.891428571428571 52 17 89.1 0 156 1 803 854 XP_065940897.1 retrovirus-related Pol polyprotein from transposon 412 [Magallana gigas] diamond 156 82 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
29045409 29045409 PRJNA900028_P_NODE_129088_length_166_cov_1.743590_g128339_i0 PRJNA900028 129088 166 1.74359 2.8943594 Haliotis rufescens 6454 Mollusca Mollusca 53.1 2.77e-6   NR XP_048251812.1 6454 g128339 i0 45.1 3.77710843373494 51 24 92.2 1 157 5 202 248 XP_048251812.1 uncharacterized protein LOC125379948 [Haliotis rufescens] diamond 627 53.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;