RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA900028", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA900028 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7253836 7253836 PRJNA900028_P_NODE_5746_length_448_cov_0.882206_g5004_i0 PRJNA900028 5746 448 0.882206 3.95228288 Eunicella cavolini 317547 Cnidaria other_Eukaryota 122 3.259999999999999e-23   NTclustered gi|2918369537|emb|OZ237719.1| 317547 g5004 i0 82.27 9 141 25 31 0 1 141 25984495 25984635 Eunicella cavolini genome assembly, chromosome: 3 blastn 4032 122 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
28950801 28950801 PRJNA900028_P_NODE_27568_length_246_cov_0.944162_g26819_i0 PRJNA900028 27568 246 0.944162 2.32263852 Hydra vulgaris 6087 Cnidaria other_Eukaryota 42.4 0.0493   NR XP_065654381.1 6087 g26819 i0 40.5 0.451219512195122 37 22 45.1 0 54 164 116 152 XP_065654381.1 uncharacterized protein LOC136080946 [Hydra vulgaris] diamond 111 42.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
30592799 30592799 PRJNA900028_P_NODE_176073_length_162_cov_1.477876_g175324_i0 PRJNA900028 176073 162 1.477876 2.39415912 Porites evermanni 104178 Cnidaria other_Eukaryota 43.9 0.00485   NR CAH3196117.1 104178 g175324 i0 45.1 0.944444444444444 51 24 92.6 2 6 155 481 528 CAH3196117.1 unnamed protein product [Porites evermanni] diamond 153 43.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites evermanni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;