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contig_metadata

24 rows where bioproject = "PRJNA900028", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 24 ✖

tax_kingdom 1

  • Bacillati · 24 ✖

bioproject 1

  • PRJNA900028 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7253576 7253576 PRJNA900028_P_NODE_34786_length_229_cov_2.327778_g34037_i0 PRJNA900028 34786 229 2.327778 5.33061162 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 185 1.9299999999999994e-42   NTclustered gi|2874254000|emb|OY970325.1| 157466 g34037 i0 84.946 261.301310043668 186 25 80 3 46 229 1304104 1304288 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 59838 185 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
8897887 8897887 PRJNA900028_P_NODE_17947_length_281_cov_3.383621_g17198_i0 PRJNA900028 17947 281 3.383621 9.50797501 Bacteria 2 Bacteria Bacteria 204 6.76e-48   NTclustered gi|2874254000|emb|OY970325.1| 157466 g17198 i0 80.139 73.8932384341637 287 45 100 11 1 281 1304902 1304622 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 20764 206 0.990291262135922 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
16177505 16177505 PRJNA900028_P_NODE_153013_length_164_cov_1.521739_g152264_i0 PRJNA900028 153013 164 1.521739 2.49565196 Armatimonadota bacterium 2033014 Bacteria Bacteria 303 3.42e-78   NTclustered gi|1493551556|dbj|LC378776.1| 2033014 g152264 i0 100 98.8109756097561 164 0 100 0 1 164 153 316 Armatimonadetes bacterium LA-DMC-2W6 gene for 16S ribosomal RNA, partial sequence blastn 16205 303 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
18726579 18726579 PRJNA900028_P_NODE_190235_length_161_cov_0.910714_g189486_i0 PRJNA900028 190235 161 0.910714 1.46624954 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 65.8 1.72e-6   NTclustered gi|663071213|gb|CP007139.1| 661478 g189486 i0 87.719 0.354037267080745 57 5 35 2 106 161 801024 800969 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 57 65.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
26675628 26675628 PRJNA900028_P_NODE_179441_length_162_cov_0.902655_g178692_i0 PRJNA900028 179441 162 0.902655 1.4623011 Armatimonadota bacterium 2033014 Bacteria Bacteria 90.9 1.38e-19   NR MBI3911232.1 2033014 g178692 i0 81.5 1.98148148148148 54 10 100 0 162 1 463 516 MBI3911232.1 potassium-transporting ATPase subunit KdpA [Armatimonadota bacterium] diamond 321 90.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27782475 27782475 PRJNA900028_P_NODE_178904_length_162_cov_0.902655_g178155_i0 PRJNA900028 178904 162 0.902655 1.4623011 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 75.5 2.34e-14   NR MCW5936407.1 2682144 g178155 i0 62.3 0.981481481481482 53 20 98.1 0 162 4 220 272 MCW5936407.1 bifunctional oligoribonuclease/PAP phosphatase NrnA [Fimbriimonadaceae bacterium] diamond 159 75.5 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27814171 27814171 PRJNA900028_P_NODE_62964_length_194_cov_1.172414_g62215_i0 PRJNA900028 62964 194 1.172414 2.27448316 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 115 1.04e-28   NR MCW3095391.1 2739509 g62215 i0 78.1 0.989690721649485 64 14 99 0 193 2 152 215 MCW3095391.1 mandelate racemase/muconate lactonizing enzyme family protein [Chthonomonadaceae bacterium] diamond 192 115 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
28097980 28097980 PRJNA900028_P_NODE_150305_length_165_cov_0.879310_g149556_i0 PRJNA900028 150305 165 0.87931 1.4508615 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 69.7 1.5e-12   NR MCC7228853.1 2682144 g149556 i0 59.3 1.96363636363636 54 21 96.4 1 161 3 184 237 MCC7228853.1 calcineurin-like phosphoesterase C-terminal domain-containing protein [Fimbriimonadaceae bacterium] diamond 324 69.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
28192571 28192571 PRJNA900028_P_NODE_167726_length_163_cov_0.894737_g166977_i0 PRJNA900028 167726 163 0.894737 1.45842131 Armatimonadota bacterium 2033014 Bacteria Bacteria 66.6 1.38e-12   NR MBC8136836.1 2033014 g166977 i0 64 1.84049079754601 50 18 92 0 2 151 49 98 MBC8136836.1 acylphosphatase [Armatimonadota bacterium] diamond 300 66.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28326576 28326576 PRJNA900028_P_NODE_145266_length_165_cov_0.879310_g144517_i0 PRJNA900028 145266 165 0.87931 1.4508615 Armatimonas 1042315 Bacteria Bacteria 51.2 1.36e-5   NR WP_184197582.1 685828 g144517 i0 52.9 4.67272727272727 51 24 92.7 0 1 153 773 823 WP_184197582.1 diguanylate cyclase [Armatimonas rosea] diamond 771 51.2 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
28382241 28382241 PRJNA900028_P_NODE_163786_length_163_cov_2.543860_g163037_i0 PRJNA900028 163786 163 2.54386 4.1464918 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 58.5 3.24e-8   NR MFN8218559.1 2682145 g163037 i0 58.8 1.84049079754601 51 17 93.9 2 9 161 495 541 MFN8218559.1 S8 family serine peptidase [Fimbriimonadales bacterium] diamond 300 58.5 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
28792516 28792516 PRJNA900028_P_NODE_162627_length_164_cov_0.886957_g161878_i0 PRJNA900028 162627 164 0.886957 1.45460948 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 90.9 2.48e-20   NR MCW3098729.1 2739509 g161878 i0 77.8 4.9390243902439 54 12 98.8 0 3 164 23 76 MCW3098729.1 ABC-type polysaccharide/polyol phosphate export system, permease component [Chthonomonadaceae bacterium] diamond 810 90.9 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
28800116 28800116 PRJNA900028_P_NODE_69947_length_189_cov_1.457143_g69198_i0 PRJNA900028 69947 189 1.457143 2.75400027 Fimbriimonas 1005038 Bacteria Bacteria 59.7 1.79e-8   NR WP_025228725.1 1005039 g69198 i0 78.9 5.46031746031746 38 8 60.3 0 186 73 305 342 WP_025228725.1 heat-inducible transcriptional repressor HrcA [Fimbriimonas ginsengisoli] diamond 1032 60.1 0.993344425956739 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
28918803 28918803 PRJNA900028_P_NODE_186148_length_162_cov_0.902655_g185399_i0 PRJNA900028 186148 162 0.902655 1.4623011 Armatimonadota bacterium 2033014 Bacteria Bacteria 65.1 1.65e-10   NR MBW3637980.1 2033014 g185399 i0 67.3 0.962962962962963 52 15 96.3 1 162 7 140 189 MBW3637980.1 glycosyltransferase family 39 protein [Armatimonadota bacterium] diamond 156 65.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29076999 29076999 PRJNA900028_P_NODE_123448_length_167_cov_0.864407_g122699_i0 PRJNA900028 123448 167 0.864407 1.44355969 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 60.1 9.86e-9   NR HVK06525.1 2933160 g122699 i0 60 0.988023952095808 55 19 98.8 1 1 165 144 195 HVK06525.1 redoxin domain-containing protein [Armatimonadaceae bacterium] diamond 165 60.1 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium
29084629 29084629 PRJNA900028_P_NODE_101608_length_175_cov_1.269841_g100859_i0 PRJNA900028 101608 175 1.269841 2.22222175 root 1 Root_unresolved Root_unresolved 64.3 3.66e-10   NR MEA2553607.1 2682144 g100859 i0 52 1.83428571428571 50 24 85.7 0 1 150 308 357 MEA2553607.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 321 64.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
29368719 29368719 PRJNA900028_P_NODE_163249_length_164_cov_0.886957_g162500_i0 PRJNA900028 163249 164 0.886957 1.45460948 Fimbriimonas 1005038 Bacteria Bacteria 93.6 1.7400000000000003e-21   NR HEY0866683.1 1936159 g162500 i0 86.8 7.75609756097561 53 7 97 0 4 162 1 53 HEY0866683.1 PspA/IM30 family protein [Fimbriimonas sp.] diamond 1272 93.6 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
29581737 29581737 PRJNA900028_P_NODE_98630_length_176_cov_1.606299_g97881_i0 PRJNA900028 98630 176 1.606299 2.82708624 Armatimonadota bacterium 2033014 Bacteria Bacteria 92.8 3.28e-20   NR MDQ3812567.1 2033014 g97881 i0 70.2 1.94318181818182 57 17 97.2 0 1 171 131 187 MDQ3812567.1 hypothetical protein [Armatimonadota bacterium] diamond 342 92.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30277312 30277312 PRJNA900028_P_NODE_155852_length_164_cov_0.886957_g155103_i0 PRJNA900028 155852 164 0.886957 1.45460948 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 63.2 7.92e-10   NR MBL8066048.1 2739509 g155103 i0 96.4 0.51219512195122 28 1 51.2 0 162 79 861 888 MBL8066048.1 aconitate hydratase AcnA [Chthonomonadaceae bacterium] diamond 84 63.2 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
30372133 30372133 PRJNA900028_P_NODE_128312_length_167_cov_0.864407_g127563_i0 PRJNA900028 128312 167 0.864407 1.44355969 Armatimonadota bacterium 2033014 Bacteria Bacteria 54.3 1.07e-6   NR MBW3638150.1 2033014 g127563 i0 55.3 0.844311377245509 47 21 84.4 0 4 144 276 322 MBW3638150.1 diguanylate cyclase [Armatimonadota bacterium] diamond 141 54.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31383145 31383145 PRJNA900028_P_NODE_98296_length_176_cov_2.133858_g97547_i0 PRJNA900028 98296 176 2.133858 3.75559008 Armatimonadota bacterium 2033014 Bacteria Bacteria 70.1 2.46e-12   NR MES2465106.1 2033014 g97547 i0 97.2 0.613636363636364 36 1 61.4 0 2 109 290 325 MES2465106.1 sugar ABC transporter permease [Armatimonadota bacterium] diamond 108 70.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31414607 31414607 PRJNA900028_P_NODE_105356_length_173_cov_1.645161_g104607_i0 PRJNA900028 105356 173 1.645161 2.84612853 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 45.8 0.00117   NR HVK03143.1 2933160 g104607 i0 43.5 0.797687861271676 46 26 79.8 0 34 171 134 179 HVK03143.1 hypothetical protein [Armatimonadaceae bacterium] diamond 138 45.8 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium
31793931 31793931 PRJNA900028_P_NODE_132337_length_166_cov_0.871795_g131588_i0 PRJNA900028 132337 166 0.871795 1.4471797 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 77.8 2.42e-15   NR HVK07109.1 2933160 g131588 i0 70.4 0.975903614457831 54 16 97.6 0 164 3 193 246 HVK07109.1 farnesyl diphosphate synthase [Armatimonadaceae bacterium] diamond 162 77.8 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium
32205517 32205517 PRJNA900028_P_NODE_145538_length_165_cov_0.879310_g144789_i0 PRJNA900028 145538 165 0.87931 1.4508615 Armatimonadota bacterium 2033014 Bacteria Bacteria 81.3 3.29e-16   NR MBC7808974.1 2033014 g144789 i0 72.7 2 55 15 100 0 1 165 250 304 MBC7808974.1 ABC transporter permease [Armatimonadota bacterium] diamond 330 81.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;