RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA900028", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA900028 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5977851 5977851 PRJNA900028_P_NODE_131085_length_166_cov_0.871795_g130336_i0 PRJNA900028 131085 166 0.871795 1.4471797 Ailoscolex lacteospumosus 1046305 Annelida Annelida 75 2.97e-9   NTclustered gi|2920003257|emb|OZ238860.1| 1046305 g130336 i0 90.909 0.921686746987952 55 5 33 0 72 126 51923743 51923797 Ailoscolex lacteospumosus genome assembly, chromosome: 1 blastn 153 75 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
17453659 17453659 PRJNA900028_P_NODE_32934_length_233_cov_1.260870_g32185_i0 PRJNA900028 32934 233 1.26087 2.9378271 Siboglinum fiordicum 27908 Annelida Annelida 409 1.07e-109   NTclustered gi|297001|emb|Z21526.1| 27908 g32185 i0 98.283 22.3476394849785 233 4 100 0 1 233 34 266 S.fiordicum 28S rRNA gene blastn 5207 409 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Siboglinum Siboglinum fiordicum
31952261 31952261 PRJNA900028_P_NODE_142797_length_165_cov_0.879310_g142048_i0 PRJNA900028 142797 165 0.87931 1.4508615 Paralvinella palmiformis 53620 Annelida Annelida 47 3.95e-4   NR KAK2169434.1 53620 g142048 i0 45.2 0.763636363636364 42 23 76.4 0 127 2 256 297 KAK2169434.1 hypothetical protein LSH36_10g12007, partial [Paralvinella palmiformis] diamond 126 47 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;