RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA898105" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA898105 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8526635 8526635 PRJNA898105_P_NODE_3267_length_323_cov_2.208000_g3067_i0 PRJNA898105 3267 323 2.208 7.13184 Jonquetella anthropi 428712 Bacteria Bacteria 398 3.3799999999999996e-106   NTclustered gi|194410714|gb|EU840722.1| 428712 g3067 i0 98.661 975.628482972136 224 3 69 0 1 224 2406 2183 Jonquetella anthropi strain E3_33 23S ribosomal RNA gene, partial sequence blastn 315128 398 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Jonquetella Jonquetella anthropi
18725278 18725278 PRJNA898105_P_NODE_4155_length_286_cov_1.840376_g3955_i0 PRJNA898105 4155 286 1.840376 5.26347536 Jonquetella anthropi 428712 Bacteria Bacteria 368 2.31e-97   NTclustered gi|194410714|gb|EU840722.1| 428712 g3955 i0 100 147.716783216783 199 0 70 0 1 199 813 615 Jonquetella anthropi strain E3_33 23S ribosomal RNA gene, partial sequence blastn 42247 368 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Jonquetella Jonquetella anthropi
23825967 23825967 PRJNA898105_P_NODE_1479_length_503_cov_2.237209_g1281_i0 PRJNA898105 1479 503 2.237209 11.25316127 Jonquetella anthropi 428712 Bacteria Bacteria 918 0   NTclustered gi|194410714|gb|EU840722.1| 428712 g1281 i0 99.602 92.0178926441352 503 2 100 0 1 503 27 529 Jonquetella anthropi strain E3_33 23S ribosomal RNA gene, partial sequence blastn 46285 918 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Jonquetella Jonquetella anthropi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;