contig_metadata
5 rows where bioproject = "PRJNA898105" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3424682 | 3424682 | PRJNA898105_P_NODE_8103_length_242_cov_0.911243_g7903_i0 | PRJNA898105 | 8103 | 242 | 0.911243 | 2.20520806 | Planctomycetales bacterium ZRK34 | 2723666 | Bacteria | Bacteria | 63.9 | 1.01e-5 | NTclustered | gi|1898316769|gb|CP050848.1| | 2723666 | g7903 | i0 | 93.023 | 0.177685950413223 | 43 | 3 | 18 | 0 | 200 | 242 | 594295 | 594337 | Planctomycetales bacterium ZRK34 chromosome, complete genome | blastn | 43 | 63.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetales bacterium ZRK34 | |||
| 5977160 | 5977160 | PRJNA898105_P_NODE_6405_length_250_cov_0.870056_g6205_i0 | PRJNA898105 | 6405 | 250 | 0.870056 | 2.17514 | Lacipirellula parvula | 2650471 | Bacteria | Bacteria | 340 | 4.31e-89 | NTclustered | gi|1761017769|dbj|AP021861.1| | 2650471 | g6205 | i0 | 91.2 | 1 | 250 | 22 | 100 | 0 | 1 | 250 | 3775882 | 3776131 | Lacipirellula parvula PX69 DNA, complete genome | blastn | 250 | 340 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellula | Lacipirellula parvula | |
| 16546739 | 16546739 | PRJNA898105_P_NODE_4353_length_283_cov_1.642857_g4153_i0 | PRJNA898105 | 4353 | 283 | 1.642857 | 4.64928531 | Humisphaera | 2807511 | Bacteria | Bacteria | 361 | 3.82e-95 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g4153 | i0 | 92.829 | 91.0459363957597 | 251 | 14 | 88 | 3 | 32 | 281 | 5064105 | 5063858 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 25766 | 363 | 0.994490358126722 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 27277112 | 27277112 | PRJNA898105_P_NODE_7483_length_245_cov_0.895349_g7283_i0 | PRJNA898105 | 7483 | 245 | 0.895349 | 2.19360505 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 122 | 1.48e-30 | NR | HZV08024.1 | 2052164 | g7283 | i0 | 80.2 | 3.95510204081633 | 81 | 16 | 99.2 | 0 | 243 | 1 | 345 | 425 | HZV08024.1 hypothetical protein [Gemmataceae bacterium] | diamond | 969 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 31224662 | 31224662 | PRJNA898105_P_NODE_7735_length_244_cov_0.900585_g7535_i0 | PRJNA898105 | 7735 | 244 | 0.900585 | 2.1974274 | Paludisphaera rhizosphaerae | 2711216 | Bacteria | Bacteria | 116 | 7.789999999999999e-31 | NR | WP_165074790.1 | 2711216 | g7535 | i0 | 79.4 | 0.836065573770492 | 68 | 14 | 83.6 | 0 | 1 | 204 | 103 | 170 | WP_165074790.1 hypothetical protein [Paludisphaera rhizosphaerae] | diamond | 204 | 116 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Paludisphaera | Paludisphaera rhizosphaerae |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;