RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA898105", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 1 ✖

tax_kingdom 1

  • Metazoa · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA898105 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17452069 17452069 PRJNA898105_P_NODE_6574_length_249_cov_0.875000_g6374_i0 PRJNA898105 6574 249 0.875 2.17875 Amphimedon queenslandica 400682 Porifera other_Eukaryota 96.3 1.29e-21   NR XP_019864009.1 400682 g6374 i0 80.8 1.2289156626506 52 10 62.7 0 1 156 274 325 XP_019864009.1 PREDICTED: cathepsin L1-like isoform X3 [Amphimedon queenslandica] diamond 306 96.3 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;