RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA898105" and tax_kingdom = "Fusobacteriati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 12 ✖

bioproject 1

  • PRJNA898105 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8897124 8897124 PRJNA898105_P_NODE_5467_length_263_cov_1.621053_g5267_i0 PRJNA898105 5467 263 1.621053 4.26336939 Fusobacterium 848 Bacteria Bacteria 486 5.5499999999999986e-133   NTclustered gi|958157244|gb|CP013336.1| 1307443 g5267 i0 100 99.9201520912547 263 0 100 0 1 263 384912 384650 Fusobacterium hwasookii ChDC F206, complete genome blastn 26279 486 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium hwasookii
9801726 9801726 PRJNA898105_P_NODE_5908_length_254_cov_1.657459_g5708_i0 PRJNA898105 5908 254 1.657459 4.20994586 Fusobacterium animalis 76859 Bacteria Bacteria 470 5.37e-128   NTclustered gi|2706480588|gb|CP084141.1| 76859 g5708 i0 100 490.716535433071 254 0 100 0 1 254 2658676 2658929 Fusobacterium animalis strain KCOM3127 chromosome, complete genome blastn 124642 470 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium animalis
11077313 11077313 PRJNA898105_P_NODE_2809_length_351_cov_1.571942_g2609_i0 PRJNA898105 2809 351 1.571942 5.51751642 Leptotrichia wadei 157687 Bacteria Bacteria 643 4.3e-180   NTclustered gi|1708582457|dbj|AP019841.1| 157687 g2609 i0 99.715 426.837606837607 351 1 100 0 1 351 2296801 2297151 Leptotrichia wadei JMUB3936 DNA, complete genome blastn 149820 643 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia wadei
16546754 16546754 PRJNA898105_P_NODE_5733_length_258_cov_1.664865_g5533_i0 PRJNA898105 5733 258 1.664865 4.2953517 Cetobacterium 180162 Bacteria Bacteria 477 3.2699999999999985e-130   NTclustered gi|2865362888|gb|CP122284.1| 188913 g5533 i0 100 4.9922480620155 258 0 100 0 1 258 734764 735021 Cetobacterium somerae strain MSU49 chromosome, complete genome blastn 1288 477 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
19095745 19095745 PRJNA898105_P_NODE_3455_length_314_cov_0.834025_g3255_i0 PRJNA898105 3455 314 0.834025 2.6188385 Cetobacterium 180162 Bacteria Bacteria 514 3.1199999999999997e-141   NTclustered gi|2666488225|gb|CP143319.1| 188913 g3255 i0 96.178 14.9745222929936 314 12 100 0 1 314 1858833 1859146 Cetobacterium somerae strain ceto chromosome, complete genome blastn 4702 514 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
19095747 19095747 PRJNA898105_P_NODE_3955_length_290_cov_1.004608_g3755_i0 PRJNA898105 3955 290 1.004608 2.9133632 Fusobacterium 848 Bacteria Bacteria 536 6.079999999999999e-148   NTclustered gi|1370537877|gb|CP028108.1| 860 g3755 i0 100 480.024137931034 290 0 100 0 1 290 463086 462797 Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome blastn 139207 536 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium periodonticum
24195787 24195787 PRJNA898105_P_NODE_8099_length_242_cov_0.911243_g7899_i0 PRJNA898105 8099 242 0.911243 2.20520806 Cetobacterium 180162 Bacteria Bacteria 442 1.1099999999999995e-119   NTclustered gi|2666488225|gb|CP143319.1| 188913 g7899 i0 99.587 6.02479338842975 242 1 100 0 1 242 1899715 1899956 Cetobacterium somerae strain ceto chromosome, complete genome blastn 1458 442 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
27118714 27118714 PRJNA898105_P_NODE_8502_length_226_cov_2.013072_g8302_i0 PRJNA898105 8502 226 2.013072 4.54954272 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 128 1.17e-35   NR WP_294095648.1 527638 g8302 i0 98.4 0.823008849557522 62 1 82.3 0 41 226 29 90 WP_294095648.1 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase [uncultured Cetobacterium sp.] diamond 186 128 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
27687956 27687956 PRJNA898105_P_NODE_5284_length_267_cov_1.278351_g5084_i0 PRJNA898105 5284 267 1.278351 3.41319717 Cetobacterium sp. 2G large 2759680 Bacteria Bacteria 150 5.82e-41   NR WP_185892595.1 2759680 g5084 i0 77.3 1.97752808988764 88 20 98.9 0 265 2 345 432 WP_185892595.1 multicopper oxidase family protein [Cetobacterium sp. 2G large] diamond 528 150 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. 2G large
27750955 27750955 PRJNA898105_P_NODE_4484_length_281_cov_1.413462_g4284_i0 PRJNA898105 4484 281 1.413462 3.97182822 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 181 4.4099999999999997e-54   NR WP_047393843.1 1339239 g4284 i0 96.8 0.99288256227758 93 3 99.3 0 280 2 191 283 WP_047393843.1 SEC-C metal-binding domain-containing protein [Cetobacterium sp. ZOR0034] diamond 279 181 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
27782436 27782436 PRJNA898105_P_NODE_2644_length_362_cov_1.065744_g2444_i0 PRJNA898105 2644 362 1.065744 3.85799328 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 221 2.95e-69   NR WP_047393843.1 1339239 g2444 i0 89.2 0.994475138121547 120 13 99.4 0 2 361 34 153 WP_047393843.1 SEC-C metal-binding domain-containing protein [Cetobacterium sp. ZOR0034] diamond 360 221 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
30213549 30213549 PRJNA898105_P_NODE_4412_length_282_cov_1.473684_g4212_i0 PRJNA898105 4412 282 1.473684 4.15578888 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 183 1.5699999999999998e-57   NR WP_047382959.1 1340502 g4212 i0 95.7 0.978723404255319 92 4 97.9 0 6 281 1 92 WP_047382959.1 Dps family protein [Cetobacterium sp. ZWU0022] diamond 276 183 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;