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contig_metadata

13 rows where bioproject = "PRJNA898105", tax_clade = "Opisthokonta" and tax_phylum = "Chordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chordata · 13 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 13 ✖

bioproject 1

  • PRJNA898105 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
873898 873898 PRJNA898105_P_NODE_7101_length_247_cov_0.885057_g6901_i0 PRJNA898105 7101 247 0.885057 2.18609079 Meleagris gallopavo 9103 Chordata Chordata 457 4.05e-124   NTclustered gi|2721460913|emb|HG999695.4| 9103 g6901 i0 100 8.87449392712551 247 0 100 0 1 247 12382031 12382277 Meleagris gallopavo genome assembly, chromosome: 15 blastn 2192 457 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Phasianidae Meleagris Meleagris gallopavo
3424665 3424665 PRJNA898105_P_NODE_6703_length_249_cov_0.875000_g6503_i0 PRJNA898105 6703 249 0.875 2.17875 Equus asinus 9793 Chordata Chordata 237 5.8e-58   NTclustered gi|2871626609|ref|XR_011505737.1| 9793 g6503 i0 84.064 1.00803212851406 251 35 100 5 1 249 773 1020 PREDICTED: Equus asinus uncharacterized lncRNA (LOC106832150), ncRNA blastn 251 237 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Perissodactyla Equidae Equus Equus asinus
8526655 8526655 PRJNA898105_P_NODE_5647_length_260_cov_1.609626_g5447_i0 PRJNA898105 5647 260 1.609626 4.1850276 Canis lupus 9612 Chordata Chordata 481 2.55e-131   NTclustered gi|168986554|gb|AC209276.7| 9615 g5447 i0 100 277.115384615385 260 0 100 0 1 260 86847 87106 Canis familiaris, clone XX-275J19, complete sequence blastn 72050 481 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
11077328 11077328 PRJNA898105_P_NODE_4589_length_279_cov_2.368932_g4389_i0 PRJNA898105 4589 279 2.368932 6.60932028 Sus scrofa 9823 Chordata Chordata 516 7.58e-142   NTclustered gi|300394049|emb|FP102128.5| 9823 g4389 i0 100 77.9247311827957 279 0 100 0 1 279 79433 79155 Pig DNA sequence from clone CH242-348J2 on chromosome X, complete sequence blastn 21741 516 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
11447987 11447987 PRJNA898105_P_NODE_6769_length_248_cov_0.885714_g6569_i0 PRJNA898105 6769 248 0.885714 2.19657072 Artiodactyla 91561 Chordata Chordata 361 3.2799999999999995e-95   NTclustered gi|2633691831|ref|XM_061429258.1| 9906 g6569 i0 92.8 1118.64919354839 250 16 100 2 1 248 3753 4002 PREDICTED: Bos javanicus solute carrier family 10 member 1 (SLC10A1), mRNA blastn 277425 364 0.991758241758242 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
14901843 14901843 PRJNA898105_P_NODE_7592_length_244_cov_2.508772_g7392_i0 PRJNA898105 7592 244 2.508772 6.12140368 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|6970310|dbj|AB019212.1| 10090 g7392 i0 100 31.8811475409836 244 0 100 0 1 244 1164 921 Mus musculus mRNA for syntaxin 7, complete cds blastn 7779 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
16176580 16176580 PRJNA898105_P_NODE_6773_length_248_cov_0.880000_g6573_i0 PRJNA898105 6773 248 0.88 2.1824 Ranitomeya imitator 111125 Chordata Chordata 91.6 4.75e-14   NTclustered gi|2851970705|ref|XM_069737400.1| 111125 g6573 i0 83 0.806451612903226 100 17 40 0 14 113 3907 4006 PREDICTED: Ranitomeya imitator vascular cell adhesion molecule 1 (VCAM1), transcript variant X1, mRNA blastn 200 91.6 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
16546753 16546753 PRJNA898105_P_NODE_5613_length_261_cov_1.255319_g5413_i0 PRJNA898105 5613 261 1.255319 3.27638259 Canis 9611 Chordata Chordata 477 3.3099999999999986e-130   NTclustered gi|1952984317|ref|XR_005370342.1| 9615 g5413 i0 99.617 4 261 1 100 0 1 261 444 704 PREDICTED: Canis lupus familiaris uncharacterized LOC102157132 (LOC102157132), ncRNA blastn 1044 477 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
17452070 17452070 PRJNA898105_P_NODE_6594_length_249_cov_0.875000_g6394_i0 PRJNA898105 6594 249 0.875 2.17875 Canis lupus 9612 Chordata Chordata 99 2.85e-16   NTclustered gi|124286935|gb|AC188664.7| 9615 g6394 i0 90.789 78.8835341365462 76 4 33 3 94 167 93657 93583 Canis Familiaris chromosome 11, clone XX-510I12, complete sequence blastn 19642 99 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
27055857 27055857 PRJNA898105_P_NODE_2282_length_390_cov_2.186120_g2082_i0 PRJNA898105 2282 390 2.18612 8.525868 Staurois parvus 386267 Chordata Chordata 58.5 5e-8   NR CAI9533415.1 386267 g2082 i0 40 2.6 110 47 70 4 306 34 1 110 CAI9533415.1 unnamed protein product [Staurois parvus] diamond 1014 58.5 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
28413866 28413866 PRJNA898105_P_NODE_6186_length_251_cov_0.865169_g5986_i0 PRJNA898105 6186 251 0.865169 2.17157419 Bufotes viridis 30338 Chordata Chordata 48.1 5.04e-4   NR CAK8609802.1 30338 g5986 i0 61.8 0.406374501992032 34 13 40.6 0 150 251 1 34 CAK8609802.1 Lamina-associated polypeptide 2, isoform alpha [Bufotes viridis] diamond 102 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis
29045388 29045388 PRJNA898105_P_NODE_8288_length_241_cov_0.916667_g8088_i0 PRJNA898105 8288 241 0.916667 2.20916747 Staurois parvus 386267 Chordata Chordata 74.3 3.94e-15   NR CAI9618505.1 386267 g8088 i0 48.2 1.03319502074689 83 36 98.3 3 3 239 13 92 CAI9618505.1 unnamed protein product, partial [Staurois parvus] diamond 249 74.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
31738361 31738361 PRJNA898105_P_NODE_7937_length_243_cov_0.905882_g7737_i0 PRJNA898105 7937 243 0.905882 2.20129326 Metazoa 33208 Chordata Chordata 57 3.6e-7   NR KAI8478467.1 7741 g7737 i0 41.6 3.03703703703704 77 40 88.9 1 7 222 39 115 KAI8478467.1 WD repeat-containing protein 26 [Branchiostoma belcheri] diamond 738 57 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;