contig_metadata
15 rows where bioproject = "PRJNA897077" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2148869 | 2148869 | PRJNA897077_P_NODE_14062_length_264_cov_1.507853_g13935_i0 | PRJNA897077 | 14062 | 264 | 1.507853 | 3.98073192 | Stigmatella aurantiaca | 41 | Bacteria | Bacteria | 315 | 2.79e-81 | NTclustered | gi|309390350|gb|CP002271.1| | 378806 | g13935 | i0 | 88.213 | 38.1287878787879 | 263 | 31 | 99 | 0 | 1 | 263 | 5835269 | 5835531 | Stigmatella aurantiaca DW4/3-1, complete genome | blastn | 10066 | 315 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 3424325 | 3424325 | PRJNA897077_P_NODE_12623_length_279_cov_1.504854_g12496_i0 | PRJNA897077 | 12623 | 279 | 1.504854 | 4.19854266 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 172 | 8.08e-50 | NR | HTV19334.1 | 2268199 | g12496 | i0 | 93.5 | 2 | 93 | 6 | 100 | 0 | 279 | 1 | 262 | 354 | HTV19334.1 serine--tRNA ligase [Polyangiaceae bacterium] | diamond | 558 | 172 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 26802451 | 26802451 | PRJNA897077_P_NODE_16861_length_249_cov_0.886364_g16734_i0 | PRJNA897077 | 16861 | 249 | 0.886364 | 2.20704636 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 132 | 8.649999999999998e-35 | NR | HEX5067653.1 | 2818507 | g16734 | i0 | 81.9 | 1 | 83 | 15 | 100 | 0 | 249 | 1 | 326 | 408 | HEX5067653.1 6-phosphofructokinase [Myxococcota bacterium] | diamond | 249 | 132 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 27087420 | 27087420 | PRJNA897077_P_NODE_19962_length_242_cov_0.923077_g19835_i0 | PRJNA897077 | 19962 | 242 | 0.923077 | 2.23384634 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 124 | 2.5299999999999993e-31 | NR | MCK6527060.1 | 2818507 | g19835 | i0 | 69.2 | 2.87603305785124 | 78 | 24 | 96.7 | 0 | 2 | 235 | 170 | 247 | MCK6527060.1 M20/M25/M40 family metallo-hydrolase [Myxococcota bacterium] | diamond | 696 | 124 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 27245346 | 27245346 | PRJNA897077_P_NODE_19463_length_243_cov_0.917647_g19336_i0 | PRJNA897077 | 19463 | 243 | 0.917647 | 2.22988221 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 154 | 5.299999999999999e-43 | NR | HVK71842.1 | 2212474 | g19336 | i0 | 92.6 | 1 | 81 | 6 | 100 | 0 | 1 | 243 | 88 | 168 | HVK71842.1 hypothetical protein [Kofleriaceae bacterium] | diamond | 243 | 154 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 27908280 | 27908280 | PRJNA897077_P_NODE_19405_length_243_cov_0.917647_g19278_i0 | PRJNA897077 | 19405 | 243 | 0.917647 | 2.22988221 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 117 | 4.59e-32 | NR | MBW2474250.1 | 2026735 | g19278 | i0 | 98.4 | 0.790123456790123 | 64 | 1 | 79 | 0 | 192 | 1 | 1 | 64 | MBW2474250.1 TraR/DksA C4-type zinc finger protein [Deltaproteobacteria bacterium] | diamond | 192 | 117 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28445483 | 28445483 | PRJNA897077_P_NODE_18526_length_245_cov_0.906977_g18399_i0 | PRJNA897077 | 18526 | 245 | 0.906977 | 2.22209365 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 55.1 | 1.34e-6 | NR | HMJ15863.1 | 2268199 | g18399 | i0 | 63.4 | 0.502040816326531 | 41 | 15 | 50.2 | 0 | 239 | 117 | 230 | 270 | HMJ15863.1 DUF1588 domain-containing protein [Polyangiaceae bacterium] | diamond | 123 | 55.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 28445486 | 28445486 | PRJNA897077_P_NODE_19586_length_243_cov_0.888235_g19459_i0 | PRJNA897077 | 19586 | 243 | 0.888235 | 2.15841105 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 65.9 | 2.58e-10 | NR | HEV3192348.1 | 2268199 | g19459 | i0 | 50.7 | 1.80246913580247 | 69 | 34 | 85.2 | 0 | 2 | 208 | 250 | 318 | HEV3192348.1 sulfatase-like hydrolase/transferase [Polyangiaceae bacterium] | diamond | 438 | 65.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 28792460 | 28792460 | PRJNA897077_P_NODE_12567_length_280_cov_1.188406_g12440_i0 | PRJNA897077 | 12567 | 280 | 1.188406 | 3.3275368 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 132 | 1.88e-33 | NR | HKA14172.1 | 2818507 | g12440 | i0 | 72.8 | 0.985714285714286 | 92 | 25 | 98.6 | 0 | 2 | 277 | 158 | 249 | HKA14172.1 filamentous hemagglutinin N-terminal domain-containing protein [Myxococcota bacterium] | diamond | 276 | 132 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 29810573 | 29810573 | PRJNA897077_P_NODE_18271_length_246_cov_0.901734_g18144_i0 | PRJNA897077 | 18271 | 246 | 0.901734 | 2.21826564 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 97.4 | 1.79e-21 | NR | MCZ6623122.1 | 2026735 | g18144 | i0 | 59.7 | 1.90243902439024 | 77 | 31 | 93.9 | 0 | 7 | 237 | 286 | 362 | MCZ6623122.1 tRNA lysidine(34) synthetase TilS [Deltaproteobacteria bacterium] | diamond | 468 | 97.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30529568 | 30529568 | PRJNA897077_P_NODE_19013_length_244_cov_0.912281_g18886_i0 | PRJNA897077 | 19013 | 244 | 0.912281 | 2.22596564 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 77 | 1.83e-14 | NR | HJN72683.1 | 2818507 | g18886 | i0 | 62.5 | 0.688524590163934 | 56 | 21 | 68.9 | 0 | 1 | 168 | 271 | 326 | HJN72683.1 hypothetical protein [Myxococcota bacterium] | diamond | 168 | 77 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 31667503 | 31667503 | PRJNA897077_P_NODE_12637_length_279_cov_1.383495_g12510_i0 | PRJNA897077 | 12637 | 279 | 1.383495 | 3.85995105 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 51.2 | 5.08e-5 | NR | MBX3131500.1 | 2268199 | g12510 | i0 | 73.3 | 1.59139784946237 | 30 | 8 | 32.3 | 0 | 190 | 279 | 1 | 30 | MBX3131500.1 phosphatidylserine decarboxylase [Polyangiaceae bacterium] | diamond | 444 | 51.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 32174019 | 32174019 | PRJNA897077_P_NODE_18798_length_244_cov_1.631579_g18671_i0 | PRJNA897077 | 18798 | 244 | 1.631579 | 3.98105276 | Archangium sp. | 1872627 | Bacteria | Bacteria | 44.3 | 0.0104 | NR | MDP3155974.1 | 1872627 | g18671 | i0 | 35.9 | 0.959016393442623 | 78 | 45 | 91 | 2 | 10 | 231 | 220 | 296 | MDP3155974.1 hypothetical protein [Archangium sp.] | diamond | 234 | 44.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. | ||
| 32426949 | 32426949 | PRJNA897077_P_NODE_19539_length_243_cov_0.917647_g19412_i0 | PRJNA897077 | 19539 | 243 | 0.917647 | 2.22988221 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 107 | 1.4199999999999999e-25 | NR | WP_129344918.1 | 56 | g19412 | i0 | 65.4 | 1 | 81 | 26 | 97.5 | 1 | 3 | 239 | 53 | 133 | WP_129344918.1 serine/threonine-protein kinase [Sorangium cellulosum] | diamond | 243 | 107 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 32836832 | 32836832 | PRJNA897077_P_NODE_15420_length_253_cov_0.866667_g15293_i0 | PRJNA897077 | 15420 | 253 | 0.866667 | 2.19266751 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 42.7 | 0.0407 | NR | MEO1233093.1 | 2818507 | g15293 | i0 | 39.2 | 0.604743083003953 | 51 | 28 | 56.9 | 1 | 21 | 164 | 446 | 496 | MEO1233093.1 DUF2330 domain-containing protein [Myxococcota bacterium] | diamond | 153 | 42.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;