RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA897077" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA897077 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8526596 8526596 PRJNA897077_P_NODE_8047_length_345_cov_1.128676_g7920_i0 PRJNA897077 8047 345 1.128676 3.8939322 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.033   NTclustered gi|471220273|ref|XM_004025160.1| 5932 g7920 i0 100 0.0811594202898551 28 0 8 0 223 250 263 236 Ichthyophthirius multifiliis ubiquitin- hect domain protein, putative (IMG5_189580) mRNA, complete cds blastn 28 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
31952210 31952210 PRJNA897077_P_NODE_11737_length_289_cov_1.319444_g11610_i0 PRJNA897077 11737 289 1.319444 3.81319316 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 77.4 1.68e-14   NR CAG9334558.1 1481888 g11610 i0 42.3 2.91695501730104 97 53 97.6 2 1 282 118 214 CAG9334558.1 unnamed protein product [Blepharisma stoltei] diamond 843 77.4 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;