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contig_metadata

3 rows where bioproject = "PRJNA897077" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 3 ✖

bioproject 1

  • PRJNA897077 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17451960 17451960 PRJNA897077_P_NODE_7214_length_363_cov_2.286207_g7087_i0 PRJNA897077 7214 363 2.286207 8.29893141 haloarchaeon 3A1-DGR 1071085 Archaea Archaea 56.5 0.003   NTclustered gi|1804090075|gb|CP048032.1| 1071085 g7087 i0 100 0.322314049586777 30 0 8 0 203 232 1418813 1418784 Haloarchaeon 3A1-DGR strain 3A1-DGR chromosome, complete genome blastn 117 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     haloarchaeon 3A1-DGR
21646318 21646318 PRJNA897077_P_NODE_19457_length_243_cov_0.917647_g19330_i0 PRJNA897077 19457 243 0.917647 2.22988221 Methanothermobacter 145260 Archaea Archaea 448 2.39e-121   NTclustered gi|427188531|dbj|AP011952.1| 866790 g19330 i0 100 4.97942386831276 242 0 99 0 1 242 1436085 1435844 Methanothermobacter sp. CaT2 DNA, complete genome blastn 1210 448 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter sp. CaT2
29897879 29897879 PRJNA897077_P_NODE_17151_length_248_cov_1.782857_g17024_i0 PRJNA897077 17151 248 1.782857 4.42148536 Thermoplasmatota archaeon 2806419 Archaea Archaea 43.9 0.00769   NR HEV8361626.1 2806419 g17024 i0 35.7 1.01612903225806 84 38 96.8 3 2 241 43 114 HEV8361626.1 hypothetical protein [Thermoplasmatota archaeon] diamond 252 43.9 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;