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contig_metadata

29 rows where bioproject = "PRJNA896973" and tax_superkingdom = "Viruses"

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tax_kingdom 3

analysis 2

tax_superkingdom 1

  • Viruses · 29 ✖

bioproject 1

  • PRJNA896973 · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2148639 2148639 PRJNA896973_P_NODE_28062_length_241_cov_0.916667_g27968_i0 PRJNA896973 28062 241 0.916667 2.20916747 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 435 1.84e-117   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g27968 i0 99.17 1 241 2 100 0 1 241 3882 4122 Malassezia restricta virus MrV40L, complete genome blastn 241 435 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
3795910 3795910 PRJNA896973_P_NODE_14583_length_295_cov_1.387387_g14489_i0 PRJNA896973 14583 295 1.387387 4.09279165 Viruses 10239 Viruses Viruses 545 1.03e-150   NTclustered gi|2209094843|gb|OL472493.1| 2900389 g14489 i0 100 10.9694915254237 295 0 100 0 1 295 1273 1567 MAG: Brine shrimp partiti-like virus 2 isolate TJ/92-18 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 3236 545 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 2
5072090 5072090 PRJNA896973_P_NODE_23944_length_247_cov_1.770115_g23850_i0 PRJNA896973 23944 247 1.770115 4.37218405 Lymphocryptovirus 10375 Viruses Viruses 457 4.05e-124   NTclustered gi|747017565|dbj|AB850658.1| 10376 g23850 i0 100 131.931174089069 247 0 100 0 1 247 40275 40521 Human herpesvirus 4 DNA, complete genome, strain: HN17 blastn 32587 457 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
7251153 7251153 PRJNA896973_P_NODE_13926_length_301_cov_1.013158_g13832_i0 PRJNA896973 13926 301 1.013158 3.04960558 Caudoviricetes sp. 2832643 Viruses Viruses 451 2.36e-122   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g13832 i0 94.539 465.730897009967 293 14 97 2 1 292 18130 18421 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 140185 451 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
8526007 8526007 PRJNA896973_P_NODE_23767_length_248_cov_0.880000_g23673_i0 PRJNA896973 23767 248 0.88 2.1824 Caudoviricetes sp. 2832643 Viruses Viruses 420 5.34e-113   NTclustered gi|2914806051|gb|OR221530.1| 2832643 g23673 i0 97.177 1 248 7 100 0 1 248 5186 4939 MAG: Caudoviricetes sp. isolate MSP1551 genomic sequence blastn 248 420 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
9801168 9801168 PRJNA896973_P_NODE_2888_length_588_cov_3.320388_g2797_i0 PRJNA896973 2888 588 3.320388 19.52388144 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 1081 0   NTclustered gi|2086089260|gb|MT648656.1| 10376 g2797 i0 99.83 260.816326530612 588 1 100 0 1 588 38086 38673 Human gammaherpesvirus 4 isolate Necker-15, partial genome blastn 153360 1081 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
13997922 13997922 PRJNA896973_P_NODE_21891_length_251_cov_0.865169_g21797_i0 PRJNA896973 21891 251 0.865169 2.17157419 Unaquatrovirus 2169622 Viruses Viruses 320 5.65e-83   NTclustered gi|937533119|ref|NC_027987.1| 745088 g21797 i0 89.641 4.97211155378486 251 26 100 0 1 251 14947 14697 Leuconostoc phage 1-A4, complete genome blastn 1248 320 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Unaquatrovirus Unaquatrovirus uv1A4
14901130 14901130 PRJNA896973_P_NODE_20892_length_255_cov_1.032967_g20798_i0 PRJNA896973 20892 255 1.032967 2.63406585 Malassezia restricta virus MrV40S 2727864 Viruses Viruses 320 5.75e-83   NTclustered gi|1832308146|gb|MN603498.1| 2727864 g20798 i0 95.522 0.788235294117647 201 8 78 1 3 202 903 1103 Malassezia restricta virus MrV40S, complete genome blastn 201 320 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40S
18724439 18724439 PRJNA896973_P_NODE_12935_length_310_cov_1.624473_g12841_i0 PRJNA896973 12935 310 1.624473 5.0358663 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 573 4.999999999999998e-159   NTclustered gi|1465382793|emb|LS992257.1| 10376 g12841 i0 100 100 310 0 100 0 1 310 166672 166363 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 31000 573 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
18724506 18724506 PRJNA896973_P_NODE_15_length_2769_cov_5.360905_g14_i0 PRJNA896973 15 2769 5.360905 148.44345945 Beihai levi-like virus 25 1922411 Viruses Viruses 3027 0   NTclustered gi|1110864435|gb|KX883480.1| 1922411 g14 i0 86.915 0.979776092452149 2713 337 98 17 66 2769 2709 6 Beihai levi-like virus 25 strain BHSC163351 hypothetical protein genes, complete cds blastn 2713 3027 1 Viruses               Beihai levi-like virus 25
18724632 18724632 PRJNA896973_P_NODE_21895_length_251_cov_0.865169_g21801_i0 PRJNA896973 21895 251 0.865169 2.17157419 Zebrafish picornavirus 1 2304617 Viruses Viruses 448 2.48e-121   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g21801 i0 98.805 3 251 3 100 0 1 251 3934 3684 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 753 448 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
19999800 19999800 PRJNA896973_P_NODE_23216_length_249_cov_0.875000_g23122_i0 PRJNA896973 23216 249 0.875 2.17875 Zebrafish picornavirus 1 2304617 Viruses Viruses 455 1.47e-123   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g23122 i0 99.598 3 249 1 100 0 1 249 292 540 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 747 455 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
20000052 20000052 PRJNA896973_S_NODE_3076_length_202_cov_4.279070_g3062_i0 PRJNA896973 3076 202 4.27907 8.6437214 Tolivirales sp. 2809914 Viruses Viruses 313 7.31e-81   NTclustered gi|2647549457|gb|OR843652.1| 2809914 g3062 i0 95 0.99009900990099 200 9 99 1 3 202 4244 4046 Tolivirales sp. strain MR233-17E/2125 polyprotein, tombus P33-like protein, and structural protein genes, complete cds blastn 200 313 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
21646212 21646212 PRJNA896973_P_NODE_5697_length_440_cov_2.002725_g5603_i0 PRJNA896973 5697 440 2.002725 8.81199 root 1 Root_unresolved Root_unresolved 813 0   NTclustered gi|1465382793|emb|LS992257.1| 10376 g5603 i0 100 104.363636363636 440 0 100 0 1 440 167779 167340 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 45920 813 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
22921605 22921605 PRJNA896973_P_NODE_13058_length_309_cov_1.305085_g12964_i0 PRJNA896973 13058 309 1.305085 4.03271265 root 1 Root_unresolved Root_unresolved 571 1.7899999999999995e-158   NTclustered gi|2294362236|gb|ON596498.1| 10376 g12964 i0 100 100 309 0 100 0 1 309 925 617 Human gammaherpesvirus 4 isolate CHLBR07 latent membrane protein LMP-1 (LMP1) gene, partial cds blastn 30900 571 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
24195561 24195561 PRJNA896973_P_NODE_25499_length_245_cov_0.895349_g25405_i0 PRJNA896973 25499 245 0.895349 2.19360505 Lymphocryptovirus 10375 Viruses Viruses 453 5.1900000000000006e-123   NTclustered gi|1519305892|dbj|AP019128.1| 10376 g25405 i0 100 186.048979591837 245 0 100 0 1 245 41283 41039 Human gammaherpesvirus 4 UPN326_PBMC DNA, nearly complete genome blastn 45582 453 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
25470768 25470768 PRJNA896973_P_NODE_7740_length_384_cov_1.829582_g7646_i0 PRJNA896973 7740 384 1.829582 7.02559488 root 1 Root_unresolved Root_unresolved 710 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g7646 i0 100 100 384 0 100 0 1 384 1740 2123 Unidentified adenovirus strain CHOP Ad5 blastn 38400 710 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
27181953 27181953 PRJNA896973_S_NODE_1522_length_311_cov_3.193277_g1508_i0 PRJNA896973 1522 311 3.193277 9.93109147 Ripoglor virus 3130730 Viruses Viruses 47.8 0.00147   NR WZH60210.1 3130730 g1508 i0 31.9 0.877813504823151 91 55 84.9 3 277 14 97 183 WZH60210.1 MAG: RNA-dependent RNA polymerase [Ripoglor virus] diamond 273 47.8 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Ripoglor virus
27435189 27435189 PRJNA896973_P_NODE_28543_length_235_cov_5.580247_g28449_i0 PRJNA896973 28543 235 5.580247 13.11358045 Tolivirales sp. 2809914 Viruses Viruses 75.1 1.31e-13   NR WRQ65272.1 2809914 g28449 i0 66 0.676595744680851 53 18 67.7 0 212 54 978 1030 WRQ65272.1 polyprotein [Tolivirales sp.] diamond 159 75.1 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
27592994 27592994 PRJNA896973_P_NODE_21724_length_251_cov_0.865169_g21630_i0 PRJNA896973 21724 251 0.865169 2.17157419 Caudoviricetes sp. 2832643 Viruses Viruses 63.5 1.15e-9   NR XOR31489.1 2832643 g21630 i0 44.7 1.01593625498008 85 36 99.2 3 2 250 125 200 XOR31489.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 255 63.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28516234 28516234 PRJNA896973_P_NODE_23447_length_248_cov_1.314286_g23353_i0 PRJNA896973 23447 248 1.314286 3.25942928 Gervaisevirus 2843385 Viruses Viruses 99.8 2.1599999999999998e-24   NR QKW95377.1 2736195 g23353 i0 58.2 2.86693548387097 79 33 95.6 0 6 242 79 157 QKW95377.1 hypothetical protein [Ralstonia phage RPZH6] diamond 711 99.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Gervaisevirus Ralstonia phage RPZH6
28760948 28760948 PRJNA896973_P_NODE_27087_length_242_cov_1.721893_g26993_i0 PRJNA896973 27087 242 1.721893 4.16698106 Caudoviricetes sp. 2832643 Viruses Viruses 118 4.27e-29   NR DAS67052.1 2832643 g26993 i0 68.8 0.991735537190083 80 25 99.2 0 240 1 448 527 DAS67052.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 240 118 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30592743 30592743 PRJNA896973_P_NODE_24993_length_246_cov_0.890173_g24899_i0 PRJNA896973 24993 246 0.890173 2.18982558 Flavobacterium phage vB_FspM_immuto_2-6A 2801477 Viruses Viruses 144 7.65e-42   NR YP_010114475.1 2801477 g24899 i0 82.9 5 82 14 100 0 246 1 59 140 YP_010114475.1 hydrolase [Flavobacterium phage vB_FspM_immuto_2-6A] diamond 1230 144 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Immutovirus Immutovirus immuto
30719127 30719127 PRJNA896973_P_NODE_4834_length_473_cov_7.300000_g4740_i0 PRJNA896973 4834 473 7.3 34.529 Beihai levi-like virus 25 1922411 Viruses Viruses 273 1.21e-86   NR APG77018.1 1922411 g4740 i0 82.2 0.995771670190275 157 28 99.6 0 471 1 372 528 APG77018.1 hypothetical protein [Beihai levi-like virus 25] diamond 471 273 1 Viruses               Beihai levi-like virus 25
30877175 30877175 PRJNA896973_P_NODE_23754_length_248_cov_0.880000_g23660_i0 PRJNA896973 23754 248 0.88 2.1824 Erysiphales associated mitovirus 1 2719863 Viruses Viruses 45.1 0.00609   NR QIP68031.1 2719863 g23660 i0 47.7 0.532258064516129 44 23 53.2 0 248 117 698 741 QIP68031.1 RNA-dependent RNA polymerase [Erysiphales associated mitovirus 1] diamond 132 45.1 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Erysiphales associated mitovirus 1
30877177 30877177 PRJNA896973_S_NODE_1974_length_280_cov_2.458937_g1960_i0 PRJNA896973 1974 280 2.458937 6.8850236 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 76.3 9.67e-14   NR UNY42122.1 3003959 g1960 i0 65.4 0.557142857142857 52 17 54.6 1 279 127 425 476 UNY42122.1 MAG: polyprotein 2 [Picornavirales sp.] diamond 156 76.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
30908918 30908918 PRJNA896973_S_NODE_2294_length_263_cov_2.705263_g2280_i0 PRJNA896973 2294 263 2.705263 7.11484169 Qianjiang tombus-like virus 56 3348124 Viruses Viruses 47 0.00143   NR XHA86470.1 3348124 g2280 i0 45.5 0.627376425855513 55 30 62.7 0 46 210 275 329 XHA86470.1 MAG: hypothetical protein [Qianjiang tombus-like virus 56] diamond 165 47 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Qianjiang tombus-like virus 56
31699254 31699254 PRJNA896973_P_NODE_27597_length_242_cov_0.911243_g27503_i0 PRJNA896973 27597 242 0.911243 2.20520806 Meldvirus drosophila17434 3116721 Viruses Viruses 47.4 8.78e-4   NR DBA45728.1 3116721 g27503 i0 40.3 0.830578512396694 67 37 83.1 2 3 203 1091 1154 DBA45728.1 MAG TPA_asm: PolBa [Meldvirus drosophila17434] diamond 201 47.4 1 Viruses               Meldvirus drosophila17434
32773825 32773825 PRJNA896973_P_NODE_19920_length_260_cov_1.459893_g19826_i0 PRJNA896973 19920 260 1.459893 3.7957218 Caudoviricetes sp. 2832643 Viruses Viruses 72.8 1.18e-12   NR XOE99632.1 2832643 g19826 i0 56.7 2.52692307692308 67 28 77.3 1 209 9 112 177 XOE99632.1 MAG: terminase large subunit [Caudoviricetes sp.] diamond 657 72.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;