RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA896973", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA896973 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3795910 3795910 PRJNA896973_P_NODE_14583_length_295_cov_1.387387_g14489_i0 PRJNA896973 14583 295 1.387387 4.09279165 Viruses 10239 Viruses Viruses 545 1.03e-150   NTclustered gi|2209094843|gb|OL472493.1| 2900389 g14489 i0 100 10.9694915254237 295 0 100 0 1 295 1273 1567 MAG: Brine shrimp partiti-like virus 2 isolate TJ/92-18 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 3236 545 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 2
18724632 18724632 PRJNA896973_P_NODE_21895_length_251_cov_0.865169_g21801_i0 PRJNA896973 21895 251 0.865169 2.17157419 Zebrafish picornavirus 1 2304617 Viruses Viruses 448 2.48e-121   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g21801 i0 98.805 3 251 3 100 0 1 251 3934 3684 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 753 448 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
19999800 19999800 PRJNA896973_P_NODE_23216_length_249_cov_0.875000_g23122_i0 PRJNA896973 23216 249 0.875 2.17875 Zebrafish picornavirus 1 2304617 Viruses Viruses 455 1.47e-123   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g23122 i0 99.598 3 249 1 100 0 1 249 292 540 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 747 455 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
30877177 30877177 PRJNA896973_S_NODE_1974_length_280_cov_2.458937_g1960_i0 PRJNA896973 1974 280 2.458937 6.8850236 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 76.3 9.67e-14   NR UNY42122.1 3003959 g1960 i0 65.4 0.557142857142857 52 17 54.6 1 279 127 425 476 UNY42122.1 MAG: polyprotein 2 [Picornavirales sp.] diamond 156 76.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;