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contig_metadata

19 rows where bioproject = "PRJNA896973", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 19 ✖

tax_phylum 1

  • Myxococcota · 19 ✖

tax_kingdom 1

bioproject 1

  • PRJNA896973 · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
873234 873234 PRJNA896973_P_NODE_23101_length_249_cov_0.875000_g23007_i0 PRJNA896973 23101 249 0.875 2.17875 Pseudomonadati 3379134 Bacteria Bacteria 146 2.98e-42   NR MBI3754747.1 2026735 g23007 i0 77.1 15.0722891566265 83 19 100 0 1 249 9 91 MBI3754747.1 DNA adenine methylase [Deltaproteobacteria bacterium] diamond 3753 146 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
3795944 3795944 PRJNA896973_P_NODE_26323_length_244_cov_0.865497_g26229_i0 PRJNA896973 26323 244 0.865497 2.11181268 Sorangium 39643 Bacteria Bacteria 106 1.67e-18   NTclustered gi|1566478966|gb|CP012672.1| 56 g26229 i0 85.859 13.0409836065574 99 14 41 0 1 99 2637937 2638035 Sorangium cellulosum strain So ce836 chromosome, complete genome blastn 3182 106 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
3795959 3795959 PRJNA896973_P_NODE_29183_length_208_cov_4.844444_g29089_i0 PRJNA896973 29183 208 4.844444 10.07644352 Polyangiaceae 49 Bacteria Bacteria 224 3.65e-54   NTclustered gi|908353314|gb|CP012159.1| 52 g29089 i0 86.256 35.9423076923077 211 23 99 5 3 208 1431182 1430973 Chondromyces crocatus strain Cm c5, complete genome blastn 7476 224 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces crocatus
5976449 5976449 PRJNA896973_P_NODE_19825_length_260_cov_4.657754_g19731_i0 PRJNA896973 19825 260 4.657754 12.1101604 Labilithrix luteola 1391654 Bacteria Bacteria 453 5.5600000000000005e-123   NTclustered gi|913610804|gb|CP012333.1| 1391654 g19731 i0 98.077 149.503846153846 260 5 100 0 1 260 3942556 3942815 Labilithrix luteola strain DSM 27648, complete genome blastn 38871 453 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
11076828 11076828 PRJNA896973_P_NODE_27449_length_242_cov_0.911243_g27355_i0 PRJNA896973 27449 242 0.911243 2.20520806 Myxococcia 32015 Bacteria Bacteria 95.1 1.28e-20   NR HTQ44979.1 2268199 g27355 i0 64.9 1.98347107438017 77 25 95.5 2 10 240 366 440 HTQ44979.1 glycosyltransferase family 39 protein [Polyangiaceae bacterium] diamond 480 95.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
19999916 19999916 PRJNA896973_P_NODE_28276_length_241_cov_0.898810_g28182_i0 PRJNA896973 28276 241 0.89881 2.1661321 Anaeromyxobacter paludicola 2918171 Bacteria Bacteria 241 4.310000000000001e-59   NTclustered gi|2199271117|dbj|AP025592.1| 2918171 g28182 i0 84.774 253.800829875519 243 33 100 4 1 241 1383976 1384216 Anaeromyxobacter paludicola DNA, complete genome blastn 61166 241 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter paludicola
22550049 22550049 PRJNA896973_P_NODE_22198_length_250_cov_1.305085_g22104_i0 PRJNA896973 22198 250 1.305085 3.2627125 Myxococcales bacterium 2026763 Bacteria Bacteria 209 1.27e-49   NTclustered gi|2258824976|gb|CP060221.1| 2026763 g22104 i0 84.375 96.124 224 24 88 10 32 250 1312681 1312464 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-35 chromosome, complete genome blastn 24031 209 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
26612385 26612385 PRJNA896973_P_NODE_23381_length_248_cov_1.622857_g23287_i0 PRJNA896973 23381 248 1.622857 4.02468536 Polyangiales bacterium 3034171 Bacteria Bacteria 119 1.6599999999999998e-31   NR HEX4355194.1 3034171 g23287 i0 76.5 2.93951612903226 81 19 98 0 1 243 74 154 HEX4355194.1 dTMP kinase [Polyangiales bacterium] diamond 729 119 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
27150093 27150093 PRJNA896973_P_NODE_27942_length_241_cov_0.916667_g27848_i0 PRJNA896973 27942 241 0.916667 2.20916747 Polyangiales bacterium 3034171 Bacteria Bacteria 128 2.38e-32   NR HKP59477.1 3034171 g27848 i0 75 0.995850622406639 80 20 99.6 0 2 241 324 403 HKP59477.1 lipase maturation factor family protein [Polyangiales bacterium] diamond 240 128 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
28097933 28097933 PRJNA896973_P_NODE_25845_length_244_cov_1.502924_g25751_i0 PRJNA896973 25845 244 1.502924 3.66713456 Polyangiales bacterium 3034171 Bacteria Bacteria 43.1 0.0269   NR MFO0610084.1 3034171 g25751 i0 38.4 0.897540983606557 73 42 89.8 1 21 239 432 501 MFO0610084.1 hypothetical protein [Polyangiales bacterium] diamond 219 43.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
28508514 28508514 PRJNA896973_S_NODE_1007_length_368_cov_2.257627_g993_i0 PRJNA896973 1007 368 2.257627 8.30806736 Myxococcales bacterium 2026763 Bacteria Bacteria 66.2 1.23e-10   NR MCA9590635.1 2026763 g993 i0 44.4 0.733695652173913 90 46 73.4 1 324 55 18 103 MCA9590635.1 hypothetical protein [Myxococcales bacterium] diamond 270 66.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28760946 28760946 PRJNA896973_P_NODE_25387_length_245_cov_0.895349_g25293_i0 PRJNA896973 25387 245 0.895349 2.19360505 Polyangiaceae bacterium 2268199 Bacteria Bacteria 95.5 1.02e-20   NR HVW26207.1 2268199 g25293 i0 61 1.95918367346939 82 30 99.2 2 1 243 126 206 HVW26207.1 hypothetical protein [Polyangiaceae bacterium] diamond 480 95.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29076960 29076960 PRJNA896973_P_NODE_27528_length_242_cov_0.911243_g27434_i0 PRJNA896973 27528 242 0.911243 2.20520806 Polyangiaceae bacterium 2268199 Bacteria Bacteria 93.2 1.52e-22   NR HEX4515231.1 2268199 g27434 i0 61.5 1.93388429752066 78 29 95.5 1 12 242 23 100 HEX4515231.1 hypothetical protein [Polyangiaceae bacterium] diamond 468 93.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29802926 29802926 PRJNA896973_P_NODE_16831_length_279_cov_1.126214_g16737_i0 PRJNA896973 16831 279 1.126214 3.14213706 Polyangiaceae bacterium 2268199 Bacteria Bacteria 90.1 1.36e-19   NR MCC6646400.1 2268199 g16737 i0 76.3 2.60215053763441 59 14 63.4 0 102 278 5 63 MCC6646400.1 phospholipase [Polyangiaceae bacterium] diamond 726 90.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30719129 30719129 PRJNA896973_S_NODE_654_length_455_cov_3.112565_g640_i0 PRJNA896973 654 455 3.112565 14.16217075 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 67 1.1e-9   NR MBI4705874.1 2026735 g640 i0 52.3 0.428571428571429 65 30 42.2 1 230 39 16 80 MBI4705874.1 polymer-forming cytoskeletal protein [Deltaproteobacteria bacterium] diamond 195 67 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30940563 30940563 PRJNA896973_P_NODE_24214_length_247_cov_0.885057_g24120_i0 PRJNA896973 24214 247 0.885057 2.18609079 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 111 1.5600000000000002e-26   NR MBP1690301.1 2026735 g24120 i0 76.1 2.61133603238866 71 17 86.2 0 31 243 1 71 MBP1690301.1 amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit [Deltaproteobacteria bacterium] diamond 645 111 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31003652 31003652 PRJNA896973_P_NODE_28054_length_241_cov_0.916667_g27960_i0 PRJNA896973 28054 241 0.916667 2.20916747 Polyangiales bacterium 3034171 Bacteria Bacteria 134 3.7e-35   NR HET6334771.1 3034171 g27960 i0 76.3 3.98340248962656 80 19 99.6 0 2 241 213 292 HET6334771.1 PQQ-binding-like beta-propeller repeat protein [Polyangiales bacterium] diamond 960 134 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
31730717 31730717 PRJNA896973_P_NODE_20977_length_254_cov_1.701657_g20883_i0 PRJNA896973 20977 254 1.701657 4.32220878 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 152 7.74e-45   NR MBS2013417.1 2026735 g20883 i0 96.4 0.992125984251969 84 3 99.2 0 3 254 103 186 MBS2013417.1 sigma-70 family RNA polymerase sigma factor [Deltaproteobacteria bacterium] diamond 252 152 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32300701 32300701 PRJNA896973_S_NODE_1779_length_293_cov_0.918182_g1765_i0 PRJNA896973 1779 293 0.918182 2.69027326 Kofleriaceae bacterium 2212474 Bacteria Bacteria 90.9 8.08e-19   NR HEY8143702.1 2212474 g1765 i0 44.9 2.00682593856655 98 51 97.3 1 9 293 217 314 HEY8143702.1 hypothetical protein [Kofleriaceae bacterium] diamond 588 90.9 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;