RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA896973" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA896973 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3424213 3424213 PRJNA896973_P_NODE_8023_length_378_cov_2.019672_g7929_i0 PRJNA896973 8023 378 2.019672 7.63436016 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 699 0   NTclustered gi|681870001|gb|KM001684.1| 1542451 g7929 i0 100 18.3042328042328 378 0 100 0 1 378 1958 2335 Myxidium streisingeri clone ZF2 18S small subunit ribosomal RNA gene, partial sequence blastn 6919 699 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
6348042 6348042 PRJNA896973_P_NODE_4385_length_493_cov_6.454762_g4291_i0 PRJNA896973 4385 493 6.454762 31.82197666 Myxobolidae 35587 Cnidaria other_Eukaryota 86.1 4.74e-12   NTclustered gi|1430506822|gb|MH630267.1| 35589 g4291 i0 88.889 3.89655172413793 72 5 14 3 423 493 389 320 Myxobolus sp. voucher CTM101 large subunit ribosomal RNA gene, partial sequence blastn 1921 86.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus sp.
10172568 10172568 PRJNA896973_P_NODE_13428_length_305_cov_1.991379_g13334_i0 PRJNA896973 13428 305 1.991379 6.07370595 Myxobolus 35588 Cnidaria other_Eukaryota 180 1.25e-40   NTclustered gi|2663986577|emb|OY756918.1| 59785 g13334 i0 90.977 40.4426229508197 133 12 44 0 35 167 6424 6556 Myxobolus squamalis isolate 71B08 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 12335 180 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis
14901410 14901410 PRJNA896973_P_NODE_8432_length_370_cov_3.518519_g8338_i0 PRJNA896973 8432 370 3.518519 13.0185203 Unicauda fimbrethilae 1720082 Cnidaria other_Eukaryota 106 2.66e-18   NTclustered gi|2089706636|gb|OK030695.1| 1720082 g8338 i0 98.333 11.6810810810811 60 1 16 0 1 60 1997 1938 Unicauda fimbrethilae large subunit ribosomal RNA gene, partial sequence blastn 4322 106 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Unicauda Unicauda fimbrethilae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;