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contig_metadata

23 rows where bioproject = "PRJNA896973", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 23 ✖

tax_phylum 1

  • Acidobacteriota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA896973 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2519642 2519642 PRJNA896973_P_NODE_17802_length_273_cov_0.935000_g17708_i0 PRJNA896973 17802 273 0.935 2.55255 Acidobacterium 33973 Bacteria Bacteria 483 7.5e-132   NTclustered gi|470484216|ref|NR_076636.1| 33075 g17708 i0 98.535 102.201465201465 273 4 100 0 1 273 707 979 Acidobacterium capsulatum strain 161 23S ribosomal RNA gene, complete sequence blastn 27901 483 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Acidobacterium Acidobacterium capsulatum
3424255 3424255 PRJNA896973_S_NODE_2783_length_244_cov_3.070175_g2769_i0 PRJNA896973 2783 244 3.070175 7.491227 Acidobacteriota bacterium 1978231 Bacteria Bacteria 364 2.489999999999999e-96   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g2769 i0 96 131.561475409836 225 8 92 1 17 241 3299054 3299277 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 32101 364 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
8526077 8526077 PRJNA896973_P_NODE_26707_length_243_cov_0.905882_g26613_i0 PRJNA896973 26707 243 0.905882 2.20129326 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 311 3.27e-80   NTclustered gi|2874253786|emb|OY969770.1| 2952895 g26613 i0 90 98.4814814814815 240 24 99 0 4 243 4657673 4657434 MAG: Candidatus Acidoferrales bacterium isolate MFD09222.bin.1.52 genome assembly, chromosome: 1 blastn 23931 311 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
12352141 12352141 PRJNA896973_P_NODE_22850_length_249_cov_0.880682_g22756_i0 PRJNA896973 22850 249 0.880682 2.19289818 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 372 1.52e-98   NTclustered gi|2874254027|emb|OY970352.1| 171953 g22756 i0 93.574 148.21686746988 249 16 100 0 1 249 2365900 2365652 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 blastn 36906 372 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
14901398 14901398 PRJNA896973_P_NODE_7892_length_381_cov_1.493506_g7798_i0 PRJNA896973 7892 381 1.493506 5.69025786 Terriglobia bacterium 2081523 Bacteria Bacteria 127 4.01e-31   NR HVN82611.1 2081523 g7798 i0 52.8 1.98425196850394 125 58 97.6 1 2 373 935 1059 HVN82611.1 hypothetical protein [Terriglobia bacterium] diamond 756 127 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
25098992 25098992 PRJNA896973_P_NODE_11880_length_321_cov_1.653226_g11786_i0 PRJNA896973 11880 321 1.653226 5.30685546 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 130 2.61e-35   NR HEX8119292.1 2283092 g11786 i0 91.1 0.738317757009346 79 7 73.8 0 237 1 1 79 HEX8119292.1 3-hydroxyacyl-CoA dehydrogenase family protein [Pyrinomonadaceae bacterium] diamond 237 130 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26834319 26834319 PRJNA896973_P_NODE_23681_length_248_cov_0.880000_g23587_i0 PRJNA896973 23681 248 0.88 2.1824 Terriglobales bacterium 2282142 Bacteria Bacteria 55.5 1.26e-6   NR MBA3914522.1 2282142 g23587 i0 68.9 0.544354838709677 45 11 50.8 1 247 122 385 429 MBA3914522.1 aspartate aminotransferase family protein [Terriglobales bacterium] diamond 135 55.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27181951 27181951 PRJNA896973_P_NODE_14622_length_295_cov_1.040541_g14528_i0 PRJNA896973 14622 295 1.040541 3.06959595 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 81.6 3.56e-16   NR HEV3253640.1 2952895 g14528 i0 47.5 1.00677966101695 99 51 99.7 1 294 1 44 142 HEV3253640.1 hypothetical protein [Candidatus Acidiferrales bacterium] diamond 297 81.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
27435187 27435187 PRJNA896973_P_NODE_26723_length_243_cov_0.905882_g26629_i0 PRJNA896973 26723 243 0.905882 2.20129326 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 69.7 7.32e-12   NR MBX9603669.1 2212468 g26629 i0 66.1 0.691358024691358 56 19 69.1 0 69 236 1 56 MBX9603669.1 VWA domain-containing protein [Bryobacteraceae bacterium] diamond 168 69.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28066402 28066402 PRJNA896973_P_NODE_23645_length_248_cov_0.880000_g23551_i0 PRJNA896973 23645 248 0.88 2.1824 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 159 1.81e-46   NR MBX9601119.1 2212468 g23551 i0 92.7 0.991935483870968 82 6 99.2 0 3 248 115 196 MBX9601119.1 menaquinone biosynthesis protein [Bryobacteraceae bacterium] diamond 246 159 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28571552 28571552 PRJNA896973_S_NODE_1427_length_320_cov_1.230769_g1413_i0 PRJNA896973 1427 320 1.230769 3.9384608 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.1 0.0136   NR MEP6801116.1 1978231 g1413 i0 35.9 0.6 64 38 60 2 20 211 344 404 MEP6801116.1 hypothetical protein [Acidobacteriota bacterium] diamond 192 45.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28926561 28926561 PRJNA896973_P_NODE_27728_length_241_cov_1.761905_g27634_i0 PRJNA896973 27728 241 1.761905 4.24619105 Pseudomonadati 3379134 Bacteria Bacteria 149 1.89e-40   NR HTY85574.1 1964179 g27634 i0 86.3 15.9336099585062 80 11 99.6 0 2 241 384 463 HTY85574.1 sulfotransferase [Silvibacterium sp.] diamond 3840 150 0.993333333333333 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Silvibacterium Silvibacterium sp.
28982295 28982295 PRJNA896973_P_NODE_15688_length_287_cov_1.065421_g15594_i0 PRJNA896973 15688 287 1.065421 3.05775827 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 178 1.82e-49   NR HEX6183262.1 2283092 g15594 i0 88.4 1.98606271777003 95 11 99.3 0 285 1 126 220 HEX6183262.1 DUF1565 domain-containing protein [Pyrinomonadaceae bacterium] diamond 570 178 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29992587 29992587 PRJNA896973_P_NODE_25651_length_245_cov_0.895349_g25557_i0 PRJNA896973 25651 245 0.895349 2.19360505 Terriglobales bacterium 2282142 Bacteria Bacteria 72.4 5.76e-14   NR HYL14595.1 2282142 g25557 i0 72.2 0.661224489795918 54 15 66.1 0 5 166 83 136 HYL14595.1 heavy metal-responsive transcriptional regulator [Terriglobales bacterium] diamond 162 72.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
29992588 29992588 PRJNA896973_P_NODE_29211_length_205_cov_4.909091_g29117_i0 PRJNA896973 29211 205 4.909091 10.06363655 Acidobacteriota bacterium 1978231 Bacteria Bacteria 71.2 1.67e-12   NR MDT4968561.1 1978231 g29117 i0 43.3 0.980487804878049 67 38 98 0 3 203 126 192 MDT4968561.1 hypothetical protein [Acidobacteriota bacterium] diamond 201 71.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30213532 30213532 PRJNA896973_P_NODE_23312_length_248_cov_2.388571_g23218_i0 PRJNA896973 23312 248 2.3885710000000002 5.92365608 Blastocatellia bacterium 2052146 Bacteria Bacteria 94.7 2e-20   NR HEY9435469.1 2052146 g23218 i0 55.7 1.91129032258065 79 35 95.6 0 248 12 631 709 HEY9435469.1 hypothetical protein [Blastocatellia bacterium] diamond 474 94.7 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
30435164 30435164 PRJNA896973_P_NODE_24533_length_246_cov_1.878613_g24439_i0 PRJNA896973 24533 246 1.878613 4.62138798 Candidatus Sulfotelmatobacter sp. 2771375 Bacteria Bacteria 102 3.07e-23   NR HEY6768979.1 2771375 g24439 i0 56.8 0.98780487804878 81 35 98.8 0 3 245 5 85 HEY6768979.1 triple tyrosine motif-containing protein [Candidatus Sulfotelmatobacter sp.] diamond 243 102 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Candidatus Korobacteraceae Candidatus Sulfotelmatobacter Candidatus Sulfotelmatobacter sp.
30845651 30845651 PRJNA896973_P_NODE_18894_length_266_cov_1.217617_g18800_i0 PRJNA896973 18894 266 1.217617 3.23886122 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 127 6.31e-32   NR HWO39108.1 3069120 g18800 i0 69.8 1.93984962406015 86 26 97 0 262 5 453 538 HWO39108.1 prolyl oligopeptidase family serine peptidase [Candidatus Acidiferrum sp.] diamond 516 127 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
31066971 31066971 PRJNA896973_S_NODE_2295_length_263_cov_2.631579_g2281_i0 PRJNA896973 2295 263 2.631579 6.92105277 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 159 5.54e-46   NR HSD29211.1 2793154 g2281 i0 91.6 2.84030418250951 83 7 94.7 0 251 3 38 120 HSD29211.1 dihydroorotate dehydrogenase [Vicinamibacteria bacterium] diamond 747 159 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
31383033 31383033 PRJNA896973_P_NODE_11256_length_328_cov_1.149020_g11162_i0 PRJNA896973 11256 328 1.14902 3.7687856 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.1 0.0138   NR MDA1313252.1 1978231 g11162 i0 47.4 0.347560975609756 38 16 34.8 1 186 299 299 332 MDA1313252.1 glycosyltransferase [Acidobacteriota bacterium] diamond 114 45.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31422225 31422225 PRJNA896973_P_NODE_24016_length_247_cov_1.327586_g23922_i0 PRJNA896973 24016 247 1.327586 3.27913742 Pseudomonadati 3379134 Bacteria Bacteria 45.8 0.00312   NR HUQ91205.1 2212468 g23922 i0 73.9 0.558704453441296 23 6 27.9 0 179 247 1 23 HUQ91205.1 site-specific integrase [Bryobacteraceae bacterium] diamond 138 45.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
32015559 32015559 PRJNA896973_P_NODE_22618_length_250_cov_0.870056_g22524_i0 PRJNA896973 22618 250 0.870056 2.17514 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 140 2.33e-41   NR HEX7316061.1 2283092 g22524 i0 90.1 4.32 71 7 85.2 0 214 2 3 73 HEX7316061.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 1080 140 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32363838 32363838 PRJNA896973_P_NODE_11319_length_327_cov_1.472441_g11225_i0 PRJNA896973 11319 327 1.4724410000000001 4.81488207 Candidatus Solibacter sp. 2068625 Bacteria Bacteria 42.7 0.0338   NR MEO8369265.1 2068625 g11225 i0 35.7 0.513761467889908 56 31 51.4 1 180 13 4 54 MEO8369265.1 hypothetical protein [Candidatus Solibacter sp.] diamond 168 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Solibacteraceae Candidatus Solibacter Candidatus Solibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;