RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA896973", tax_clade = "Bacteria candidate phyla" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 5 ✖

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA896973 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6348014 6348014 PRJNA896973_P_NODE_24345_length_247_cov_0.885057_g24251_i0 PRJNA896973 24345 247 0.885057 2.18609079 Minisyncoccota bacterium 2053589 Bacteria Bacteria 89.7 1.02e-19   NR MDR3558288.1 2053589 g24251 i0 61.2 0.813765182186235 67 26 81.4 0 203 3 105 171 MDR3558288.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 201 89.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
18724672 18724672 PRJNA896973_P_NODE_23555_length_248_cov_0.880000_g23461_i0 PRJNA896973 23555 248 0.88 2.1824 Candidatus Niyogibacteria bacterium 2750078 Bacteria Bacteria 63.9 1.04e-5   NTclustered gi|1950817574|gb|CP066691.1| 2750078 g23461 i0 93.023 0.173387096774194 43 3 17 0 72 114 397195 397237 MAG: Candidatus Niyogibacteria bacterium isolate NC_groundwater_707_Ag_S-0.2um_45_26 chromosome blastn 43 63.9 1 Bacteria Bacteria candidate phyla   Candidatus Niyogiibacteriota         Candidatus Niyogibacteria bacterium
27150092 27150092 PRJNA896973_P_NODE_19362_length_263_cov_1.621053_g19268_i0 PRJNA896973 19362 263 1.621053 4.26336939 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 128 2.76e-32   NR HUL35395.1 2212470 g19268 i0 76.5 0.96958174904943 85 20 97 0 4 258 151 235 HUL35395.1 hypothetical protein [Candidatus Eiseniibacteriota bacterium] diamond 255 128 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
31604396 31604396 PRJNA896973_P_NODE_14556_length_295_cov_1.554054_g14462_i0 PRJNA896973 14556 295 1.554054 4.5844593 Minisyncoccota bacterium 2053589 Bacteria Bacteria 132 7.4699999999999984e-34   NR HVX90663.1 2053589 g14462 i0 63.9 0.986440677966102 97 35 98.6 0 5 295 214 310 HVX90663.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 291 132 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32585203 32585203 PRJNA896973_P_NODE_26939_length_243_cov_0.905882_g26845_i0 PRJNA896973 26939 243 0.905882 2.20129326 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 130 7.03e-33   NR MFN8599926.1 2838779 g26845 i0 84 1 81 13 100 0 243 1 685 765 MFN8599926.1 endonuclease MutS2 [Candidatus Binatia bacterium] diamond 243 130 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;