RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA896973", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 4 ✖

tax_clade 1

  • Amoebozoa · 4 ✖

bioproject 1

  • PRJNA896973 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3423912 3423912 PRJNA896973_P_NODE_19823_length_260_cov_5.251337_g19729_i0 PRJNA896973 19823 260 5.251337 13.6534762 Fuligo septica 159720 Evosea other_Eukaryota 475 1.1899999999999999e-129   NTclustered gi|381139265|emb|HE655082.1| 159720 g19729 i0 99.615 48.5346153846154 260 1 100 0 1 260 1932 1673 Fuligo septica partial 28S rRNA gene, isolate IW-1 blastn 12619 475 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
16175897 16175897 PRJNA896973_P_NODE_20913_length_254_cov_3.198895_g20819_i0 PRJNA896973 20913 254 3.198895 8.1251933 Fuligo septica 159720 Evosea other_Eukaryota 412 9.18e-111   NTclustered gi|37515398|emb|AJ584697.1| 159720 g20819 i0 96.063 1 254 8 100 1 1 254 6511 6260 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 254 412 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
16176066 16176066 PRJNA896973_P_NODE_29073_length_220_cov_10.530612_g28979_i0 PRJNA896973 29073 220 10.530612 23.1673464 Fuligo septica 159720 Evosea other_Eukaryota 335 1.7299999999999996e-87   NTclustered gi|37515398|emb|AJ584697.1| 159720 g28979 i0 100 2.57272727272727 181 0 82 0 1 181 13837 14017 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 566 335 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
28855609 28855609 PRJNA896973_S_NODE_808_length_408_cov_2.800000_g794_i0 PRJNA896973 808 408 2.8 11.424 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 78.6 6.47e-14   NR PRP77133.1 1890364 g794 i0 62.5 0.411764705882353 56 20 41.2 1 206 39 116 170 PRP77133.1 hypothetical protein PROFUN_14547 [Planoprotostelium fungivorum] diamond 168 78.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;