RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA896758" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA896758 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2148104 2148104 PRJNA896758_P_NODE_13042_length_318_cov_1.983673_g12652_i0 PRJNA896758 13042 318 1.983673 6.30808014 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 60.2 1.78e-4   NTclustered gi|2794970009|ref|XM_067877330.1| 2049356 g12652 i0 89.583 0.238993710691824 48 3 14 2 220 265 3250 3203 Monocercomonoides exilis DNA repair endonuclease XPF (MONOS_7037), partial mRNA blastn 76 60.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
12351753 12351753 PRJNA896758_P_NODE_14230_length_305_cov_0.991379_g13840_i0 PRJNA896758 14230 305 0.991379 3.02370595 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 219 2.6499999999999998e-52   NTclustered gi|2794977019|ref|XM_067869277.1| 2049356 g13840 i0 79.866 10.3508196721311 298 60 98 0 2 299 466 169 Monocercomonoides exilis putative Calmodulin (MONOS_16368), mRNA blastn 3157 219 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
28958407 28958407 PRJNA896758_P_NODE_24528_length_245_cov_0.895349_g24138_i0 PRJNA896758 24528 245 0.895349 2.19360505 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.3 3.23e-6   NR KAJ4462935.1 342808 g24138 i0 44.4 2.15510204081633 54 27 62.4 1 64 216 37 90 KAJ4462935.1 putative translation initiation factor 4E [Paratrimastix pyriformis] diamond 528 54.3 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;