RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA896758", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA896758 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28389804 28389804 PRJNA896758_P_NODE_15646_length_289_cov_1.425926_g15256_i0 PRJNA896758 15646 289 1.425926 4.12092614 Nitrosopumilus 338191 Archaea Archaea 79.7 8.66e-16   NR AIF23423.1 1456385 g15256 i0 40 3.49826989619377 85 50 87.2 1 258 7 49 133 AIF23423.1 ribonuclease Z (rnz) [uncultured marine thaumarchaeote SAT1000_15_E07] diamond 1011 79.7 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote SAT1000_15_E07
32142159 32142159 PRJNA896758_P_NODE_24998_length_244_cov_0.900585_g24608_i0 PRJNA896758 24998 244 0.900585 2.1974274 Nitrosarchaeum sp. 2026886 Archaea Archaea 44.7 0.00246   NR MCA9813148.1 2026886 g24608 i0 50 0.565573770491803 46 23 56.6 0 3 140 72 117 MCA9813148.1 transposase [Nitrosarchaeum sp.] diamond 138 44.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;