contig_metadata
27 rows where bioproject = "PRJNA896758" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8525644 | 8525644 | PRJNA896758_P_NODE_23407_length_247_cov_0.885057_g23017_i0 | PRJNA896758 | 23407 | 247 | 0.885057 | 2.18609079 | Myxococcia | 32015 | Bacteria | Bacteria | 150 | 2.05e-41 | NR | HXX69662.1 | 2268199 | g23017 | i0 | 86.3 | 7.78542510121457 | 80 | 11 | 97.2 | 0 | 3 | 242 | 92 | 171 | HXX69662.1 class II fumarate hydratase [Polyangiaceae bacterium] | diamond | 1923 | 150 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 17451126 | 17451126 | PRJNA896758_P_NODE_9634_length_367_cov_2.744898_g9244_i0 | PRJNA896758 | 9634 | 367 | 2.744898 | 10.07377566 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 473 | 6.279999999999999e-129 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g9244 | i0 | 89.946 | 195.983651226158 | 368 | 35 | 99 | 1 | 2 | 367 | 3943241 | 3942874 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 71926 | 473 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 18724221 | 18724221 | PRJNA896758_P_NODE_10675_length_351_cov_1.086331_g10285_i0 | PRJNA896758 | 10675 | 351 | 1.086331 | 3.81302181 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 599 | 9.45e-167 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g10285 | i0 | 97.436 | 153.136752136752 | 351 | 9 | 100 | 0 | 1 | 351 | 3942509 | 3942859 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 53751 | 599 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 23825068 | 23825068 | PRJNA896758_P_NODE_5859_length_470_cov_1.790932_g5470_i0 | PRJNA896758 | 5859 | 470 | 1.790932 | 8.4173804 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 490 | 8.17e-134 | NTclustered | gi|2258824976|gb|CP060221.1| | 2026763 | g5470 | i0 | 85.745 | 80.6617021276596 | 470 | 60 | 99 | 7 | 1 | 467 | 1312454 | 1312919 | MAG: Myxococcales bacterium isolate HK-STAS-MYXO-35 chromosome, complete genome | blastn | 37911 | 490 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 26866133 | 26866133 | PRJNA896758_P_NODE_16941_length_281_cov_1.129808_g16551_i0 | PRJNA896758 | 16941 | 281 | 1.129808 | 3.17476048 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 134 | 2.65e-36 | NR | MCG3174412.1 | 2818507 | g16551 | i0 | 66.7 | 0.96085409252669 | 90 | 30 | 96.1 | 0 | 5 | 274 | 157 | 246 | MCG3174412.1 hypothetical protein [Myxococcota bacterium] | diamond | 270 | 134 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 27024023 | 27024023 | PRJNA896758_P_NODE_25542_length_243_cov_0.905882_g25152_i0 | PRJNA896758 | 25542 | 243 | 0.905882 | 2.20129326 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 68.6 | 1.86e-11 | NR | MEO8552247.1 | 2212474 | g25152 | i0 | 48.2 | 1.04938271604938 | 85 | 38 | 98.8 | 3 | 3 | 242 | 180 | 263 | MEO8552247.1 hypothetical protein [Kofleriaceae bacterium] | diamond | 255 | 68.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 27150065 | 27150065 | PRJNA896758_P_NODE_17782_length_275_cov_1.524752_g17392_i0 | PRJNA896758 | 17782 | 275 | 1.524752 | 4.193068 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 55.1 | 2.49e-6 | NR | HRE88458.1 | 2818507 | g17392 | i0 | 67.6 | 0.370909090909091 | 34 | 11 | 37.1 | 0 | 265 | 164 | 58 | 91 | HRE88458.1 fibrinogen-like YCDxxxxGGGW domain-containing protein [Myxococcota bacterium] | diamond | 102 | 55.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 27150074 | 27150074 | PRJNA896758_P_NODE_22702_length_248_cov_1.628571_g22312_i0 | PRJNA896758 | 22702 | 248 | 1.628571 | 4.03885608 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 140 | 1.34e-38 | NR | MDP2345659.1 | 2026735 | g22312 | i0 | 75.6 | 0.991935483870968 | 82 | 20 | 99.2 | 0 | 2 | 247 | 12 | 93 | MDP2345659.1 DMT family transporter [Deltaproteobacteria bacterium] | diamond | 246 | 140 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27245318 | 27245318 | PRJNA896758_P_NODE_22723_length_248_cov_1.400000_g22333_i0 | PRJNA896758 | 22723 | 248 | 1.4 | 3.472 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 64.3 | 8.74e-11 | NR | MCU0686357.1 | 2268199 | g22333 | i0 | 85 | 0.967741935483871 | 40 | 6 | 48.4 | 0 | 247 | 128 | 100 | 139 | MCU0686357.1 Rrf2 family transcriptional regulator [Polyangiaceae bacterium] | diamond | 240 | 64.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 27529611 | 27529611 | PRJNA896758_P_NODE_20543_length_255_cov_1.692308_g20153_i0 | PRJNA896758 | 20543 | 255 | 1.692308 | 4.3153854 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 72.4 | 1.19e-12 | NR | MBL9099532.1 | 2026763 | g20153 | i0 | 47.7 | 1.01176470588235 | 86 | 38 | 95.3 | 2 | 246 | 4 | 265 | 348 | MBL9099532.1 bis-aminopropyl spermidine synthase family protein [Myxococcales bacterium] | diamond | 258 | 72.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 28413811 | 28413811 | PRJNA896758_P_NODE_13726_length_310_cov_2.945148_g13336_i0 | PRJNA896758 | 13726 | 310 | 2.945148 | 9.1299588 | Archangium gephyra | 48 | Bacteria | Bacteria | 111 | 7.32e-26 | NR | PZR15492.1 | 48 | g13336 | i0 | 100 | 0.483870967741935 | 50 | 0 | 48.4 | 0 | 161 | 310 | 508 | 557 | PZR15492.1 MAG: hypothetical protein DI536_08570 [Archangium gephyra] | diamond | 150 | 111 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 29045335 | 29045335 | PRJNA896758_P_NODE_24028_length_246_cov_0.890173_g23638_i0 | PRJNA896758 | 24028 | 246 | 0.890173 | 2.18982558 | Sandaracinus sp. | 2024858 | Bacteria | Bacteria | 70.1 | 8.86e-12 | NR | MAQ13482.1 | 2024858 | g23638 | i0 | 46.5 | 2.68292682926829 | 71 | 37 | 86.6 | 1 | 219 | 7 | 321 | 390 | MAQ13482.1 amidase [Sandaracinus sp.] | diamond | 660 | 70.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus sp. | |||
| 29487035 | 29487035 | PRJNA896758_P_NODE_19550_length_263_cov_1.321053_g19160_i0 | PRJNA896758 | 19550 | 263 | 1.321053 | 3.47436939 | Sandaracinus sp. | 2024858 | Bacteria | Bacteria | 87 | 1.18e-17 | NR | MCB9619160.1 | 2024858 | g19160 | i0 | 52.4 | 3.85551330798479 | 82 | 37 | 93.5 | 1 | 247 | 2 | 292 | 371 | MCB9619160.1 aldehyde dehydrogenase family protein [Sandaracinus sp.] | diamond | 1014 | 87 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus sp. | |||
| 29518740 | 29518740 | PRJNA896758_P_NODE_19090_length_266_cov_1.512953_g18700_i0 | PRJNA896758 | 19090 | 266 | 1.512953 | 4.02445498 | Myxococcaceae bacterium | 2484252 | Bacteria | Bacteria | 62.4 | 4.08e-9 | NR | HYR55913.1 | 2484252 | g18700 | i0 | 46.3 | 1.55639097744361 | 67 | 33 | 72.2 | 1 | 240 | 49 | 212 | 278 | HYR55913.1 SDR family oxidoreductase [Myxococcaceae bacterium] | diamond | 414 | 62.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcaceae bacterium | |||
| 29866166 | 29866166 | PRJNA896758_P_NODE_24891_length_244_cov_0.900585_g24501_i0 | PRJNA896758 | 24891 | 244 | 0.900585 | 2.1974274 | Citreicoccus inhibens | 2849499 | Bacteria | Bacteria | 132 | 1.24e-35 | NR | WP_217082086.1 | 2849499 | g24501 | i0 | 75 | 4.89344262295082 | 80 | 20 | 98.4 | 0 | 2 | 241 | 180 | 259 | WP_217082086.1 FAD-dependent thymidylate synthase [Citreicoccus inhibens] | diamond | 1194 | 132 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Citreicoccus | Citreicoccus inhibens | ||
| 29960878 | 29960878 | PRJNA896758_P_NODE_21091_length_251_cov_1.297753_g20701_i0 | PRJNA896758 | 21091 | 251 | 1.297753 | 3.25736003 | Paraliomyxa miuraensis | 376150 | Bacteria | Bacteria | 64.3 | 1.01e-9 | NR | WP_266220655.1 | 376150 | g20701 | i0 | 37.3 | 0.99203187250996006 | 83 | 51 | 98 | 1 | 5 | 250 | 404 | 486 | WP_266220655.1 choice-of-anchor I family protein [Paraliomyxa miuraensis] | diamond | 249 | 64.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Paraliomyxa | Paraliomyxa miuraensis | |||
| 30189706 | 30189706 | PRJNA896758_P_NODE_18312_length_272_cov_1.130653_g17922_i0 | PRJNA896758 | 18312 | 272 | 1.130653 | 3.07537616 | Bacteria | 2 | Bacteria | Bacteria | 44.7 | 0.0101 | NR | MFA9470571.1 | 2026735 | g17922 | i0 | 44.4 | 1.98529411764706 | 36 | 20 | 39.7 | 0 | 259 | 152 | 244 | 279 | MFA9470571.1 Kazal-type serine protease inhibitor domain-containing protein [Deltaproteobacteria bacterium] | diamond | 540 | 44.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30340597 | 30340597 | PRJNA896758_P_NODE_13632_length_312_cov_0.811715_g13242_i0 | PRJNA896758 | 13632 | 312 | 0.811715 | 2.5325508 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 104 | 1.31e-24 | NR | MCA9507341.1 | 2026763 | g13242 | i0 | 51 | 0.961538461538462 | 100 | 48 | 96.2 | 1 | 301 | 2 | 56 | 154 | MCA9507341.1 hypothetical protein [Myxococcales bacterium] | diamond | 300 | 104 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30529521 | 30529521 | PRJNA896758_P_NODE_10573_length_352_cov_1.369176_g10183_i0 | PRJNA896758 | 10573 | 352 | 1.369176 | 4.81949952 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 102 | 1.45e-24 | NR | WP_061608780.1 | 56 | g10183 | i0 | 49 | 3.69886363636364 | 100 | 49 | 85.2 | 2 | 325 | 26 | 47 | 144 | WP_061608780.1 pyridoxamine 5'-phosphate oxidase family protein [Sorangium cellulosum] | diamond | 1302 | 102 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 30655952 | 30655952 | PRJNA896758_P_NODE_8453_length_390_cov_1.536278_g8063_i0 | PRJNA896758 | 8453 | 390 | 1.536278 | 5.9914842 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 44.3 | 0.0402 | NR | HKC58972.1 | 2026763 | g8063 | i0 | 35.8 | 0.623076923076923 | 81 | 30 | 56.9 | 3 | 226 | 5 | 24 | 89 | HKC58972.1 peptidoglycan-associated lipoprotein Pal [Myxococcales bacterium] | diamond | 243 | 44.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30719086 | 30719086 | PRJNA896758_P_NODE_13894_length_308_cov_2.331915_g13504_i0 | PRJNA896758 | 13894 | 308 | 2.331915 | 7.1822982 | Polyangia bacterium | 3058050 | Bacteria | Bacteria | 91.3 | 6.98e-19 | NR | HZS39580.1 | 3058050 | g13504 | i0 | 43.4 | 2.02597402597403 | 106 | 52 | 99.4 | 3 | 307 | 2 | 280 | 381 | HZS39580.1 WSC domain-containing protein [Polyangia bacterium] | diamond | 624 | 91.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangia bacterium | ||||||
| 30877161 | 30877161 | PRJNA896758_P_NODE_26294_length_241_cov_1.392857_g25904_i0 | PRJNA896758 | 26294 | 241 | 1.392857 | 3.35678537 | Archangium gephyra | 48 | Bacteria | Bacteria | 146 | 1.24e-41 | NR | PZR10841.1 | 48 | g25904 | i0 | 97.5 | 0.995850622406639 | 80 | 2 | 99.6 | 0 | 2 | 241 | 118 | 197 | PZR10841.1 MAG: ABC transporter permease [Archangium gephyra] | diamond | 240 | 146 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 31098186 | 31098186 | PRJNA896758_P_NODE_17215_length_279_cov_1.339806_g16825_i0 | PRJNA896758 | 17215 | 279 | 1.339806 | 3.73805874 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 46.6 | 0.00239 | NR | MEJ7603518.1 | 2212474 | g16825 | i0 | 60.8 | 1.09677419354839 | 51 | 7 | 54.8 | 2 | 153 | 1 | 1 | 38 | MEJ7603518.1 trypsin-like peptidase domain-containing protein [Kofleriaceae bacterium] | diamond | 306 | 46.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 31137354 | 31137354 | PRJNA896758_P_NODE_22275_length_249_cov_0.875000_g21885_i0 | PRJNA896758 | 22275 | 249 | 0.875 | 2.17875 | Bacteria | 2 | Bacteria | Bacteria | 58.2 | 1.51e-7 | NR | MFT3772735.1 | 1971901 | g21885 | i0 | 50.9 | 7.03614457831325 | 53 | 26 | 63.9 | 0 | 225 | 67 | 580 | 632 | MFT3772735.1 hypothetical protein [Minicystis sp.] | diamond | 1752 | 58.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis sp. | |||
| 31295686 | 31295686 | PRJNA896758_P_NODE_21875_length_250_cov_0.870056_g21485_i0 | PRJNA896758 | 21875 | 250 | 0.870056 | 2.17514 | Bacteria | 2 | Bacteria | Bacteria | 79.3 | 3.78e-15 | NR | MCB9651304.1 | 2026735 | g21485 | i0 | 50 | 2.82 | 76 | 37 | 90 | 1 | 4 | 228 | 296 | 371 | MCB9651304.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 705 | 79.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32181572 | 32181572 | PRJNA896758_P_NODE_9458_length_371_cov_1.550336_g9068_i0 | PRJNA896758 | 9458 | 371 | 1.550336 | 5.75174656 | Myxococcia | 32015 | Bacteria | Bacteria | 107 | 2.5999999999999996e-24 | NR | MCC7537080.1 | 2026735 | g9068 | i0 | 53.3 | 2.53099730458221 | 107 | 50 | 86.5 | 0 | 321 | 1 | 9 | 115 | MCC7537080.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 939 | 107 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32781420 | 32781420 | PRJNA896758_P_NODE_19800_length_261_cov_1.494681_g19410_i0 | PRJNA896758 | 19800 | 261 | 1.494681 | 3.90111741 | Archangium | 47 | Bacteria | Bacteria | 134 | 2.56e-34 | NR | WP_052517748.1 | 83451 | g19410 | i0 | 77.1 | 12.4367816091954 | 83 | 19 | 95.4 | 0 | 260 | 12 | 643 | 725 | WP_052517748.1 PEP/pyruvate-binding domain-containing protein [Archangium violaceum] | diamond | 3246 | 134 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;