RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA896758", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 12 ✖

tax_phylum 1

  • Kitrinoviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA896758 · 12 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
872860 872860 PRJNA896758_P_NODE_22201_length_249_cov_1.369318_g21811_i0 PRJNA896758 22201 249 1.369318 3.40960182 Carlavirus vignae 3427805 Viruses Viruses 372 1.52e-98   NTclustered gi|2505219822|gb|OP611426.1| 67761 g21811 i0 93.574 87.8875502008032 249 16 100 0 1 249 8182 7934 Cowpea mild mottle virus isolate Buritama_BR, complete genome blastn 21884 372 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae
4701359 4701359 PRJNA896758_P_NODE_16824_length_282_cov_0.842105_g16434_i0 PRJNA896758 16824 282 0.842105 2.3747361 Carlavirus vignae 3427805 Viruses Viruses 494 3.6e-135   NTclustered gi|2017771285|gb|MW657188.1| 67761 g16434 i0 98.233 100.354609929078 283 4 100 1 1 282 381 99 Cowpea mild mottle virus clone BP1:1 triple gene block 1 (ORF2) gene, complete cds blastn 28300 494 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae
5976241 5976241 PRJNA896758_P_NODE_9585_length_368_cov_2.915254_g9195_i0 PRJNA896758 9585 368 2.915254 10.72813472 Carlavirus vignae 3427805 Viruses Viruses 438 2.3e-118   NTclustered gi|2505219822|gb|OP611426.1| 67761 g9195 i0 88.108 3.01086956521739 370 42 100 1 1 368 6528 6897 Cowpea mild mottle virus isolate Buritama_BR, complete genome blastn 1108 438 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae
11076371 11076371 PRJNA896758_P_NODE_22509_length_249_cov_0.875000_g22119_i0 PRJNA896758 22509 249 0.875 2.17875 Carlavirus vignae 3427805 Viruses Viruses 455 1.47e-123   NTclustered gi|2505219822|gb|OP611426.1| 67761 g22119 i0 99.598 100 249 1 100 0 1 249 6114 6362 Cowpea mild mottle virus isolate Buritama_BR, complete genome blastn 24900 455 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae
12351807 12351807 PRJNA896758_P_NODE_23290_length_247_cov_1.321839_g22900_i0 PRJNA896758 23290 247 1.321839 3.26494233 Carlavirus vignae 3427805 Viruses Viruses 446 8.759999999999998e-121   NTclustered gi|2017770961|gb|MW657026.1| 67761 g22900 i0 99.19 99.9878542510122 247 2 100 0 1 247 5242 5488 Cowpea mild mottle virus clone P3a:9 viral replicase (ORF1) gene, complete cds blastn 24697 446 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae
12351812 12351812 PRJNA896758_P_NODE_23590_length_247_cov_0.885057_g23200_i0 PRJNA896758 23590 247 0.885057 2.18609079 Carlavirus vignae 3427805 Viruses Viruses 446 8.759999999999998e-121   NTclustered gi|2909031160|gb|PQ825743.1| 67761 g23200 i0 99.19 25.3805668016194 247 2 100 0 1 247 252 6 Cowpea mild mottle virus isolate CPMMV-Soy coat protein gene, partial cds blastn 6269 446 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae
12351849 12351849 PRJNA896758_P_NODE_470_length_1604_cov_2.387329_g310_i0 PRJNA896758 470 1604 2.387329 38.29275716 Carlavirus vignae 3427805 Viruses Viruses 2839 0   NTclustered gi|2505219801|gb|OP611423.1| 67761 g310 i0 98.628 79.5317955112219 1604 21 99 1 2 1604 8191 6588 Cowpea mild mottle virus isolate LEM1_BR, complete genome blastn 127569 2839 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae
14900771 14900771 PRJNA896758_P_NODE_21572_length_250_cov_1.757062_g21182_i0 PRJNA896758 21572 250 1.757062 4.392655 Zhejiang betaflexivirus 2 2824414 Viruses Viruses 431 2.489999999999999e-116   NTclustered gi|2075444446|gb|MW897315.1| 2824414 g21182 i0 97.984 93.388 248 5 99 0 1 248 7790 8037 MAG: Zhejiang betaflexivirus 2 isolate 15-k141_99752, complete genome blastn 23347 431 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Zhejiang betaflexivirus 2
20370277 20370277 PRJNA896758_P_NODE_21916_length_250_cov_0.870056_g21526_i0 PRJNA896758 21916 250 0.870056 2.17514 Carlavirus 12163 Viruses Viruses 440 4.1399999999999976e-119   NTclustered gi|2907520831|gb|PQ834430.1| 67761 g21526 i0 98.406 100.24 251 3 100 1 1 250 353 603 Cowpea mild mottle virus isolate CPMMV-Soy-Seed coat protein gene, complete cds blastn 25060 440 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae
22549705 22549705 PRJNA896758_P_NODE_25398_length_243_cov_0.905882_g25008_i0 PRJNA896758 25398 243 0.905882 2.20129326 Zhejiang betaflexivirus 2 2824414 Viruses Viruses 449 6.65e-122   NTclustered gi|2075444446|gb|MW897315.1| 2824414 g25008 i0 100 26.4115226337449 243 0 100 0 1 243 7552 7794 MAG: Zhejiang betaflexivirus 2 isolate 15-k141_99752, complete genome blastn 6418 449 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Zhejiang betaflexivirus 2
25098766 25098766 PRJNA896758_P_NODE_10020_length_361_cov_1.222222_g9630_i0 PRJNA896758 10020 361 1.222222 4.41222142 Carlavirus vignae 3427805 Viruses Viruses 638 2.0699999999999996e-178   NTclustered gi|555431087|gb|KF554101.1| 67761 g9630 i0 98.615 87.8504155124654 361 4 100 1 1 361 2504 2145 Cowpea mild mottle virus isolate CPMMV:BR:GO:10:4 triple gene block 1, triple gene block 2, triple gene block 3, coat protein, and putative nucleic acid binding protein genes, complete cds blastn 31714 638 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae
25098847 25098847 PRJNA896758_P_NODE_20100_length_259_cov_1.241935_g19710_i0 PRJNA896758 20100 259 1.241935 3.21661165 Carlavirus vignae 3427805 Viruses Viruses 457 4.279999999999999e-124   NTclustered gi|2505219829|gb|OP611427.1| 67761 g19710 i0 98.456 74.5057915057915 259 4 100 0 1 259 6715 6973 Cowpea mild mottle virus isolate Rubiacea_BR, complete genome blastn 19297 457 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;