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contig_metadata

20 rows where bioproject = "PRJNA896758", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 20 ✖

tax_phylum 1

  • Chloroflexota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA896758 · 20 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9800661 9800661 PRJNA896758_P_NODE_20168_length_258_cov_1.654054_g19778_i0 PRJNA896758 20168 258 1.654054 4.26745932 Anaerolineae bacterium 2052143 Bacteria Bacteria 140 8.28e-38   NR HET7088837.1 2052143 g19778 i0 75.6 2 86 21 100 0 1 258 113 198 HET7088837.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Anaerolineae bacterium] diamond 516 140 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
26612369 26612369 PRJNA896758_P_NODE_25841_length_242_cov_1.112426_g25451_i0 PRJNA896758 25841 242 1.112426 2.69207092 Chloroflexaceae bacterium 2562117 Bacteria Bacteria 43.1 0.0218   NR HMQ30078.1 2562117 g25451 i0 42.2 0.557851239669422 45 21 55.8 2 17 151 86 125 HMQ30078.1 hypothetical protein [Chloroflexaceae bacterium] diamond 135 43.1 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae   Chloroflexaceae bacterium
26675513 26675513 PRJNA896758_P_NODE_15521_length_290_cov_1.235023_g15131_i0 PRJNA896758 15521 290 1.235023 3.5815667 Anaerolineae bacterium 2052143 Bacteria Bacteria 77.4 2.05e-14   NR MCC7162784.1 2052143 g15131 i0 49.5 3.6 93 42 93.1 2 11 280 147 237 MCC7162784.1 nucleoside hydrolase [Anaerolineae bacterium] diamond 1044 77.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
26866155 26866155 PRJNA896758_P_NODE_7581_length_412_cov_2.389381_g7191_i0 PRJNA896758 7581 412 2.389381 9.84424972 Caldilineaceae bacterium 2614250 Bacteria Bacteria 70.5 1.54e-11   NR MCB0111190.1 2614250 g7191 i0 39.5 0.902912621359223 124 51 79.4 4 350 24 130 244 MCB0111190.1 serine protease [Caldilineaceae bacterium] diamond 372 70.5 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
27063378 27063378 PRJNA896758_P_NODE_14722_length_299_cov_0.907080_g14332_i0 PRJNA896758 14722 299 0.90708 2.7121692 Chloroflexota 200795 Bacteria Bacteria 136 1.98e-35   NR OQY32290.1 1971724 g14332 i0 60.2 3.93311036789298 98 39 98.3 0 296 3 189 286 OQY32290.1 MAG: aspartate aminotransferase family protein [Anaerolineaceae bacterium 4572_5.1] diamond 1176 137 0.992700729927007 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium 4572_5.1
27498199 27498199 PRJNA896758_P_NODE_26483_length_241_cov_0.916667_g26093_i0 PRJNA896758 26483 241 0.916667 2.20916747 Ktedonobacterales bacterium 2306968 Bacteria Bacteria 41.2 0.0232   NR HEY7835567.1 2306968 g26093 i0 42.6 0.672199170124481 54 29 67.2 2 80 241 10 61 HEY7835567.1 hypothetical protein [Ktedonobacterales bacterium] diamond 162 41.2 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales     Ktedonobacterales bacterium
27592952 27592952 PRJNA896758_P_NODE_15204_length_293_cov_1.050000_g14814_i0 PRJNA896758 15204 293 1.05 3.0765 Chloroflexota bacterium 2026724 Bacteria Bacteria 58.5 8.8e-9   NR TDA67627.1 2026724 g14814 i0 46.6 0.593856655290102 58 30 59.4 1 210 37 6 62 TDA67627.1 MAG: hypothetical protein D9V45_01830 [Chloroflexota bacterium] diamond 174 58.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28192484 28192484 PRJNA896758_P_NODE_21946_length_250_cov_0.870056_g21556_i0 PRJNA896758 21946 250 0.870056 2.17514 Herpetosiphonaceae bacterium 2720503 Bacteria Bacteria 43.5 0.0116   NR HEY0734754.1 2720503 g21556 i0 44.2 0.516 43 24 51.6 0 4 132 20 62 HEY0734754.1 tetratricopeptide repeat-containing protein [Herpetosiphonaceae bacterium] diamond 129 43.5 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae   Herpetosiphonaceae bacterium
28823895 28823895 PRJNA896758_P_NODE_14948_length_296_cov_1.000000_g14558_i0 PRJNA896758 14948 296 1 2.96 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 43.9 0.0257   NR MEO5986898.1 3047546 g14558 i0 42 0.699324324324324 69 37 67.9 2 61 261 136 203 MEO5986898.1 tRNA guanosine(34) transglycosylase Tgt [Candidatus Limnocylindria bacterium] diamond 207 43.9 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
28823896 28823896 PRJNA896758_P_NODE_15208_length_293_cov_1.027273_g14818_i0 PRJNA896758 15208 293 1.027273 3.00990989 Chloroflexota bacterium 2026724 Bacteria Bacteria 55.1 2.75e-6   NR RMF38463.1 2026724 g14818 i0 36 1.02389078498294 100 60 98.3 1 288 1 33 132 RMF38463.1 MAG: hypothetical protein D6759_00870 [Chloroflexota bacterium] diamond 300 55.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29021679 29021679 PRJNA896758_P_NODE_25028_length_244_cov_0.900585_g24638_i0 PRJNA896758 25028 244 0.900585 2.1974274 root 1 Root_unresolved Root_unresolved 53.5 5.98e-6   NR WP_126631492.1 2014873 g24638 i0 41.6 10.1926229508197 77 36 84.8 3 243 37 48 123 WP_126631492.1 right-handed parallel beta-helix repeat-containing protein [Dictyobacter alpinus] diamond 2487 53.5 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Dictyobacteraceae Dictyobacter Dictyobacter alpinus
29518722 29518722 PRJNA896758_P_NODE_11490_length_339_cov_1.176692_g11100_i0 PRJNA896758 11490 339 1.176692 3.98898588 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.7 0.0207   NR MEA3345876.1 2026724 g11100 i0 37.5 0.778761061946903 88 43 67.3 2 48 275 3 90 MEA3345876.1 hypothetical protein [Chloroflexota bacterium] diamond 264 42.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29581618 29581618 PRJNA896758_P_NODE_25930_length_242_cov_0.911243_g25540_i0 PRJNA896758 25930 242 0.911243 2.20520806 Chloroflexi bacterium RBG_13_6 1797636 Bacteria Bacteria 44.3 0.00254   NR OGO09954.1 1797636 g25540 i0 55.8 1.36363636363636 43 17 50.8 1 2 124 51 93 OGO09954.1 MAG: hypothetical protein A3K46_05140 [Chloroflexi bacterium RBG_13_60_9] diamond 330 44.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexi bacterium RBG_13_60_9
29613205 29613205 PRJNA896758_P_NODE_25950_length_242_cov_0.911243_g25560_i0 PRJNA896758 25950 242 0.911243 2.20520806 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 142 3.78e-39   NR HEY8168252.1 2952938 g25560 i0 93.8 1.98347107438017 80 5 99.2 0 2 241 17 96 HEY8168252.1 hypothetical protein [Candidatus Limnocylindrales bacterium] diamond 480 142 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
30087220 30087220 PRJNA896758_P_NODE_24372_length_245_cov_0.895349_g23982_i0 PRJNA896758 24372 245 0.895349 2.19360505 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 66.6 1.3e-10   NR MEX2160153.1 2026734 g23982 i0 44.3 0.96734693877551 79 38 91.8 4 236 12 106 182 MEX2160153.1 kelch repeat-containing protein [Dehalococcoidia bacterium] diamond 237 66.6 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
30094841 30094841 PRJNA896758_P_NODE_25492_length_243_cov_0.905882_g25102_i0 PRJNA896758 25492 243 0.905882 2.20129326 Bacteria 2 Bacteria Bacteria 114 4.97e-29   NR MCS6843115.1 2306055 g25102 i0 68.4 14.641975308642 79 25 97.5 0 238 2 39 117 MCS6843115.1 3-methyl-2-oxobutanoate hydroxymethyltransferase [Caldilineales bacterium] diamond 3558 115 0.991304347826087 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales     Caldilineales bacterium
30908903 30908903 PRJNA896758_P_NODE_25414_length_243_cov_0.905882_g25024_i0 PRJNA896758 25414 243 0.905882 2.20129326 Aggregatilinea lenta 913108 Bacteria Bacteria 124 1.5999999999999998e-32   NR WP_119070884.1 913108 g25024 i0 78.8 0.987654320987654 80 17 98.8 0 242 3 150 229 WP_119070884.1 carbohydrate ABC transporter permease [Aggregatilinea lenta] diamond 240 124 1 Bacteria   Bacillati Chloroflexota Anaerolineae Aggregatilineales Aggregatilineaceae Aggregatilinea Aggregatilinea lenta
32268846 32268846 PRJNA896758_P_NODE_25598_length_243_cov_0.905882_g25208_i0 PRJNA896758 25598 243 0.905882 2.20129326 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 76.6 4.25e-14   NR HAD06929.1 2024896 g25208 i0 44.4 1.98765432098765 81 44 98.8 1 2 241 692 772 HAD06929.1 hypothetical protein [Anaerolineaceae bacterium] diamond 483 76.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
32899728 32899728 PRJNA896758_P_NODE_22920_length_248_cov_0.880000_g22530_i0 PRJNA896758 22920 248 0.88 2.1824 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 141 2.11e-39   NR CAA9364578.1 1672391 g22530 i0 79.3 0.991935483870968 82 17 99.2 0 247 2 148 229 CAA9364578.1 MAG: Mobile element protein [uncultured Chloroflexia bacterium] diamond 246 141 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
32907449 32907449 PRJNA896758_P_NODE_14800_length_298_cov_1.017778_g14410_i0 PRJNA896758 14800 298 1.017778 3.03297844 Bacillati 1783272 Bacteria Bacteria 48.1 8.69e-4   NR MCC6457233.1 2614250 g14410 i0 34.2 3.71476510067114 73 48 73.5 0 2 220 8 80 MCC6457233.1 NAD-dependent epimerase/dehydratase family protein [Caldilineaceae bacterium] diamond 1107 48.5 0.991752577319588 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;