contig_metadata
5 rows where bioproject = "PRJNA896758", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12723503 | 12723503 | PRJNA896758_P_NODE_9450_length_371_cov_1.825503_g9060_i0 | PRJNA896758 | 9450 | 371 | 1.825503 | 6.77261613 | Lawsonia | 41707 | Bacteria | Bacteria | 542 | 1.72e-149 | NTclustered | gi|2318587541|gb|CP107054.1| | 29546 | g9060 | i0 | 92.992 | 304.466307277628 | 371 | 26 | 100 | 0 | 1 | 371 | 653832 | 654202 | Lawsonia intracellularis strain PPE-GX01-2022 chromosome, complete genome | blastn | 112957 | 542 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Lawsonia | Lawsonia intracellularis | ||
| 18724332 | 18724332 | PRJNA896758_P_NODE_25855_length_242_cov_0.911243_g25465_i0 | PRJNA896758 | 25855 | 242 | 0.911243 | 2.20520806 | Desulfobacteraceae bacterium | 2049433 | Bacteria | Bacteria | 101 | 6.649999999999999e-23 | NR | MCG6905396.1 | 2049433 | g25465 | i0 | 62.7 | 2.76446280991736 | 75 | 28 | 93 | 0 | 227 | 3 | 293 | 367 | MCG6905396.1 leucyl aminopeptidase [Desulfobacteraceae bacterium] | diamond | 669 | 101 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacteraceae bacterium | |||
| 22549596 | 22549596 | PRJNA896758_P_NODE_11898_length_333_cov_2.073077_g11508_i0 | PRJNA896758 | 11898 | 333 | 2.073077 | 6.90334641 | Desulfuromonas versatilis | 2802975 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|2065532709|dbj|AP024355.1| | 2802975 | g11508 | i0 | 94.444 | 1.05105105105105 | 36 | 0 | 11 | 2 | 182 | 216 | 1629224 | 1629258 | Desulfuromonas versatilis NIT-T3 DNA, complete genome | blastn | 350 | 54.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonas | Desulfuromonas versatilis | ||
| 31066953 | 31066953 | PRJNA896758_P_NODE_23415_length_247_cov_0.885057_g23025_i0 | PRJNA896758 | 23415 | 247 | 0.885057 | 2.18609079 | Desulfomicrobium norvegicum | 52561 | Bacteria | Bacteria | 42.7 | 0.0373 | NR | WP_092190130.1 | 52561 | g23025 | i0 | 34.7 | 0.874493927125506 | 72 | 39 | 80.2 | 2 | 11 | 208 | 132 | 201 | WP_092190130.1 hemolytic protein HlpA-like protein [Desulfomicrobium norvegicum] | diamond | 216 | 42.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfomicrobiaceae | Desulfomicrobium | Desulfomicrobium norvegicum | ||
| 31604381 | 31604381 | PRJNA896758_P_NODE_21856_length_250_cov_0.870056_g21466_i0 | PRJNA896758 | 21856 | 250 | 0.870056 | 2.17514 | Candidatus Dadabacteria bacterium | 2080303 | Bacteria | Bacteria | 44.3 | 0.0103 | NR | KAB2833988.1 | 2080303 | g21466 | i0 | 39.2 | 1.788 | 74 | 39 | 88.8 | 2 | 245 | 24 | 105 | 172 | KAB2833988.1 MAG: hypothetical protein F9K51_02640 [Candidatus Dadabacteria bacterium] | diamond | 447 | 44.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Dadabacteria | Candidatus Dadabacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;