RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA896758", tax_kingdom = "Orthornavirae" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 8 ✖

tax_kingdom 1

  • Orthornavirae · 8 ✖

bioproject 1

  • PRJNA896758 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
872844 872844 PRJNA896758_P_NODE_1_length_8278_cov_71.580378_g0_i0 PRJNA896758 1 8278 71.580378 5925.42369084 Zebrafish picornavirus 1 2304617 Viruses Viruses 13651 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g0 i0 96.438 3.02464363372795 8281 287 100 6 1 8278 8295 20 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 25038 13651 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
2148231 2148231 PRJNA896758_P_NODE_2_length_8278_cov_70.724071_g0_i1 PRJNA896758 2 8278 70.724071 5854.53859738 Zebrafish picornavirus 1 2304617 Viruses Viruses 13640 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g0 i1 96.413 3.02464363372795 8281 289 100 6 1 8278 8295 20 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 25038 13640 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
3423672 3423672 PRJNA896758_P_NODE_3_length_8278_cov_70.262645_g0_i2 PRJNA896758 3 8278 70.262645 5816.3417531 Zebrafish picornavirus 1 2304617 Viruses Viruses 13590 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g0 i2 96.305 3.02464363372795 8281 298 100 6 1 8278 8295 20 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 25038 13590 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
4701382 4701382 PRJNA896758_P_NODE_19324_length_265_cov_0.802083_g18934_i0 PRJNA896758 19324 265 0.802083 2.12551995 Zebrafish picornavirus 1 2304617 Viruses Viruses 407 4.49e-109   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g18934 i0 94.34 3 265 15 100 0 1 265 1340 1604 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 795 407 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
5976189 5976189 PRJNA896758_P_NODE_305_length_1866_cov_18.607362_g0_i4 PRJNA896758 305 1866 18.607362 347.21337492 Zebrafish picornavirus 1 2304617 Viruses Viruses 3118 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g0 i4 96.838 2.96730975348339 1866 58 100 1 1 1866 1884 20 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 5537 3118 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
8525654 8525654 PRJNA896758_P_NODE_247_length_2016_cov_19.200206_g0_i3 PRJNA896758 247 2016 19.200206 387.07615296 Zebrafish picornavirus 1 2304617 Viruses Viruses 3044 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g0 i3 93.908 3.00496031746032 2019 120 100 1 1 2016 3281 1263 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 6058 3044 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
12351809 12351809 PRJNA896758_P_NODE_23390_length_247_cov_0.885057_g23000_i0 PRJNA896758 23390 247 0.885057 2.18609079 Zebrafish picornavirus 1 2304617 Viruses Viruses 385 1.94e-102   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g23000 i0 94.737 2.98785425101215 247 13 100 0 1 247 2936 2690 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 738 385 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
31509580 31509580 PRJNA896758_P_NODE_24116_length_246_cov_0.890173_g23726_i0 PRJNA896758 24116 246 0.890173 2.18982558 Durnavirales sp. 2809355 Viruses Viruses 49.3 1.9e-4   NR WRQ64726.1 2809355 g23726 i0 41 1.01219512195122 83 46 98.8 3 246 4 10 91 WRQ64726.1 RNA-dependent RNA polymerase, partial [Durnavirales sp.] diamond 249 49.3 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Durnavirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;