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contig_metadata

4 rows where bioproject = "PRJNA896758", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA896758 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17821455 17821455 PRJNA896758_P_NODE_20294_length_257_cov_1.673913_g19904_i0 PRJNA896758 20294 257 1.673913 4.30195641 Bacteria 2 Bacteria Bacteria 424 4.3e-114   NTclustered gi|563353835|gb|CP006915.1| 1394711 g19904 i0 96.498 261.661478599222 257 8 100 1 1 257 451110 451365 Candidatus Saccharibacteria bacterium RAAC3_TM7_1, complete genome blastn 67247 425 0.997647058823529 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RAAC3_TM7_1
21274805 21274805 PRJNA896758_P_NODE_26837_length_232_cov_2.578616_g26447_i0 PRJNA896758 26837 232 2.578616 5.98238912 Candidatus Saccharibacteria bacterium oral taxon 955 2572087 Bacteria Bacteria 296 8.68e-76   NTclustered gi|1805658607|gb|CP047918.1| 2572087 g26447 i0 89.655 9.88362068965517 232 24 100 0 1 232 795168 795399 Candidatus Saccharibacteria bacterium oral taxon 955 strain FS14P chromosome, complete genome blastn 2293 296 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 955
26960603 26960603 PRJNA896758_P_NODE_24402_length_245_cov_0.895349_g24012_i0 PRJNA896758 24402 245 0.895349 2.19360505 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 131 1.51e-35   NR HSH17903.1 2973664 g24012 i0 79 0.991836734693878 81 17 99.2 0 244 2 86 166 HSH17903.1 DNA repair protein RadC [Candidatus Saccharimonadales bacterium] diamond 243 131 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
28950709 28950709 PRJNA896758_P_NODE_21588_length_250_cov_1.666667_g21198_i0 PRJNA896758 21588 250 1.666667 4.1666675 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 99 2.3000000000000003e-22   NR NLA43612.1 2026720 g21198 i0 57.8 0.996 83 35 99.6 0 249 1 28 110 NLA43612.1 HNH endonuclease [Candidatus Saccharibacteria bacterium] diamond 249 99 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;